myRT

myRT report for GCA_004923395.1_ASM492339v1

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Seq: CP039503.1 Salmonella enterica subsp. enterica serovar Worthington strain 7101.67 chromosome, complete genome (4882218 bp)
Overview 1 RT 1: 4372105-4381068 bp Neighborhood of RT #1 [4372105, 4381073] DUF4156 RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 4372105-4372458 bp Ori: QCH08238.1 Feature: domain Description: DUF4156 Location: 4372174-4372450 bp Feature: domain Description: DUF41 56 Location: 43721 74-4372450 bp Feature: gene Location: 4372818-4373066 bp Feature: gene Location: 4373094-4374749 bp Gene: ltrA Feature: domain Description: RVT_N Location: 4373145-4373388 bp Feature: domain Description: RVT_N Location: 43731 45-4373388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4373433-4374078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4373433-4374078 bp Feature: domain Description: GIIM Note: maturase Location: 4374132-4374363 bp Feature: domain Description: GIIM Note: maturase Location: 43741 32-4374363 bp Feature: domain Description: HNHc Note: nucleases Location: 4374576-4374735 bp Feature: domain Description: HNHc Note: nucleases Location: 4374576-4374735 bp Feature: gene Location: 4375978-4376271 bp Feature: gene Location: 4376318-4377994 bp Ori: QCH08241.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4376381-4376615 bp Feature: domain Description: RVT_N Location: 4376381 -437661 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4376669-4377314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4376669-437731 4 bp Feature: domain Description: GIIM Note: maturase Location: 4377368-4377599 bp Feature: domain Description: GIIM Note: maturase Location: 4377368-4377599 bp Feature: domain Description: HNHc Note: nucleases Location: 4377809-4377965 bp Feature: domain Description: HNHc Note: nucleases Location: 4377809-4377965 bp Feature: gene Location: 4379090-4380736 bp Ori: QCH08242.1 Gene: groL Feature: domain Description: groEL Location: 4379096-4380722 bp Feature: domain Description: groEL Location: 4379096-4380722 bp Feature: gene Location: 4380780-4381073 bp Ori: QCH08243.1 Gene: groES Feature: domain Description: groES Location: 4380783-4381068 bp Feature: domain Description: groES Location: 4380783-4381 068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)