myRT

myRT report for GCA_004924315.1_ASM492431v1

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Seq: CP037742.1 Klebsiella pneumoniae strain ST23 chromosome, complete genome (5393085 bp)
Overview 1 RT 1: 1770997-1775868 bp 2 RT 2: 3181804-3185899 bp 3 RT 3: 4755271-4760740 bp Neighborhood of RT #1 [1770997, 1775882] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3181804, 3185955] PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [4755271, 4760760] conj_conj_conj_TIGR03751 traC_PFL_4706 RVT-UG2 HTH_XRE HTH_XRE Feature: gene Location: 1770997-1772166 bp Ori: QCH18018.1 Gene: dacD Feature: domain Description: dacD Location: 1771006-1772161 bp Feature: domain Description: dacD Location: 1 771 006-1 7721 61 bp Feature: gene Location: 1772435-1772686 bp Feature: gene Location: 1772686-1774170 bp Ori: QCH18020.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773088-1773778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 773088-1 773778 bp Feature: gene Location: 1774252-1774725 bp Ori: QCH18021.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1774255-1774714 bp Feature: domain Description: PRK1 001 6 Location: 1 774255-1 77471 4 bp Feature: gene Location: 1774824-1775882 bp Ori: QCH18022.1 Feature: domain Description: YccC Location: 1774830-1775868 bp Feature: domain Description: YccC Location: 1 774830-1 775868 bp Feature: gene Location: 3181804-3182223 bp Ori: QCH19271.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3181807-3182218 bp Feature: domain Description: PRK1 0276 Location: 31 81 807-31 8221 8 bp Feature: gene Location: 3182377-3182628 bp Feature: gene Location: 3182628-3184112 bp Ori: QCH19273.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183030-3183720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 83030-31 83720 bp Feature: gene Location: 3184403-3184645 bp Ori: QCH19274.1 Feature: domain Description: DinI Location: 3184454-3184634 bp Feature: domain Description: DinI Location: 31 84454-31 84634 bp Feature: gene Location: 3184816-3185955 bp Ori: QCH19275.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3184999-3185899 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 31 84999-31 85899 bp Feature: gene Location: 4755271-4755630 bp Ori: QCH20650.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 4755289-4755616 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 4755289-475561 6 bp Feature: gene Location: 4755627-4758257 bp Ori: QCH20651.1 Feature: domain Description: traC_PFL_4706 Location: 4755666-4758246 bp Feature: domain Description: traC_PFL_4706 Location: 4755666-4758246 bp Feature: gene Location: 4758745-4760022 bp Ori: QCH20652.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4758943-4759729 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4758943-4759729 bp Feature: gene Location: 4760220-4760447 bp Ori: QCH20653.1 Feature: domain Description: HTH_XRE Location: 4760262-4760424 bp Feature: domain Description: HTH_XRE Location: 4760262-4760424 bp Feature: gene Location: 4760530-4760760 bp Ori: QCH20654.1 Feature: domain Description: HTH_XRE Location: 4760572-4760740 bp Feature: domain Description: HTH_XRE Location: 4760572-4760740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), conj_conj_conj_TIGR03751, traC_PFL_4706 (TIGR03744), RVT-UG2
HTH_XRE (smart00530)