myRT

myRT report for GCA_005014075.1_ASM501407v1

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Seq: CP031902.1 Escherichia coli O104:H4 strain FWSEC0009 chromosome, complete genome (5277234 bp)
Overview 1 RT 1: 908888-912415 bp 2 RT 2: 922906-930359 bp 3 RT 3: 4560749-4564126 bp 4 RT 4: 4757032-4760931 bp 5 RT 5: 4777070-4784436 bp Neighborhood of RT #1 [908888, 912415] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [922906, 930358] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4560749, 4564555] COG2085 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #4 [4757032, 4760931] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #5 [4777070, 4784836] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM InsE Feature: gene Location: 908888-909625 bp Feature: domain Description: PHA02517 Location: 909272-909626 bp Feature: domain Description: PHA0251 7 Location: 909272-909626 bp Feature: gene Location: 909618-909989 bp Feature: gene Location: 910283-911806 bp Ori: QCH55047.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910556-911288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 0556-91 1 288 bp Feature: domain Description: GIIM Note: maturase Location: 911363-911561 bp Feature: domain Description: GIIM Note: maturase Location: 91 1 363-91 1 561 bp Feature: gene Location: 911896-912369 bp Feature: domain Description: PHA02517 Location: 911902-912367 bp Feature: domain Description: PHA0251 7 Location: 91 1 902-91 2367 bp Feature: gene Location: 912335-912415 bp Feature: gene Location: 922906-927024 bp Ori: QCH55057.1 Feature: domain Description: Peptidase_S6 Location: 923059-925231 bp Feature: domain Description: Peptidase_S6 Location: 923059-925231 bp Feature: domain Description: autotrans_barl Location: 925795-927022 bp Feature: domain Description: autotrans_barl Location: 925795-927022 bp Feature: gene Location: 927189-927662 bp Feature: domain Description: PHA02517 Location: 927195-927660 bp Feature: domain Description: PHA0251 7 Location: 9271 95-927660 bp Feature: gene Location: 927752-929275 bp Ori: QCH55058.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928025-928757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928025-928757 bp Feature: domain Description: GIIM Note: maturase Location: 928832-929030 bp Feature: domain Description: GIIM Note: maturase Location: 928832-929030 bp Feature: gene Location: 929569-930000 bp Feature: gene Location: 929933-930358 bp Feature: domain Description: PHA02517 Location: 930023-930359 bp Feature: domain Description: PHA0251 7 Location: 930023-930359 bp Feature: gene Location: 4560749-4561162 bp Ori: QCH58462.1 Feature: domain Description: COG2085 Location: 4560848-4560995 bp Feature: domain Description: COG2085 Location: 4560848-4560995 bp Feature: gene Location: 4561089-4561576 bp Feature: domain Description: PHA02517 Location: 4561092-4561263 bp Feature: domain Description: PHA0251 7 Location: 4561 092-4561 263 bp Feature: gene Location: 4561657-4563180 bp Ori: QCH58463.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4561930-4562662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4561 930-4562662 bp Feature: domain Description: GIIM Note: maturase Location: 4562737-4562935 bp Feature: domain Description: GIIM Note: maturase Location: 4562737-4562935 bp Feature: gene Location: 4563474-4563911 bp Feature: gene Location: 4563838-4564555 bp Feature: domain Description: InsE Location: 4563877-4564126 bp Feature: domain Description: InsE Location: 4563877-45641 26 bp Feature: gene Location: 4757032-4757771 bp Feature: domain Description: InsE Location: 4757035-4757371 bp Feature: domain Description: InsE Location: 4757035-4757371 bp Feature: gene Location: 4757764-4758135 bp Feature: gene Location: 4758429-4759952 bp Ori: QCH58649.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4758702-4759434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4758702-4759434 bp Feature: domain Description: GIIM Note: maturase Location: 4759509-4759707 bp Feature: domain Description: GIIM Note: maturase Location: 4759509-4759707 bp Feature: gene Location: 4760042-4760515 bp Feature: domain Description: PHA02517 Location: 4760048-4760513 bp Feature: domain Description: PHA0251 7 Location: 4760048-476051 3 bp Feature: gene Location: 4760718-4760931 bp Feature: gene Location: 4777070-4781188 bp Ori: QCH58660.1 Feature: domain Description: Peptidase_S6 Location: 4777223-4779395 bp Feature: domain Description: Peptidase_S6 Location: 4777223-4779395 bp Feature: domain Description: autotrans_barl Location: 4779959-4781186 bp Feature: domain Description: autotrans_barl Location: 4779959-4781 1 86 bp Feature: gene Location: 4781353-4781826 bp Feature: domain Description: PHA02517 Location: 4781359-4781824 bp Feature: domain Description: PHA0251 7 Location: 4781 359-4781 824 bp Feature: gene Location: 4781916-4783439 bp Ori: QCH58661.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4782189-4782921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47821 89-4782921 bp Feature: domain Description: GIIM Note: maturase Location: 4782996-4783194 bp Feature: domain Description: GIIM Note: maturase Location: 4782996-47831 94 bp Feature: gene Location: 4783733-4784104 bp Feature: gene Location: 4784097-4784836 bp Feature: domain Description: InsE Location: 4784100-4784436 bp Feature: domain Description: InsE Location: 47841 00-4784436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), COG2085 (Predicted dinucleotide-binding enzyme ), InsE (COG2963)