myRT

myRT report for GCA_005144905.1_ASM514490v1

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Seq: CP039701.1 Vibrio cyclitrophicus strain ECSMB14105 chromosome 2, complete sequence (1737956 bp)
Overview 1 RT 1: 1174229-1180692 bp Neighborhood of RT #1 [1174229, 1180703] Lpd PBP2_HisJ_LAO RVT_N RVT-GII GIIM MhpC Arabinose_bd HTH_ARAC Feature: gene Location: 1174229-1175713 bp Ori: QCI73362.1 Feature: domain Description: Lpd Location: 1174268-1175636 bp Feature: domain Description: Lpd Location: 1 1 74268-1 1 75636 bp Feature: gene Location: 1175951-1176091 bp Feature: domain Description: PBP2_HisJ_LAO Location: 1175954-1176080 bp Feature: domain Description: PBP2_HisJ_LAO Location: 1 1 75954-1 1 76080 bp Feature: gene Location: 1176836-1178308 bp Ori: QCI73363.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1176884-1177127 bp Feature: domain Description: RVT_N Location: 1 1 76884-1 1 771 27 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177172-1177799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 771 72-1 1 77799 bp Feature: domain Description: GIIM Note: maturase Location: 1177859-1178084 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 77859-1 1 78084 bp Feature: gene Location: 1178771-1179682 bp Ori: QCI73364.1 Feature: domain Description: MhpC Location: 1178879-1179668 bp Feature: domain Description: MhpC Location: 1 1 78879-1 1 79668 bp Feature: gene Location: 1179660-1180703 bp Ori: QCI73365.1 Feature: domain Description: Arabinose_bd Location: 1179828-1180311 bp Feature: domain Description: Arabinose_bd Location: 1 1 79828-1 1 8031 1 bp Feature: domain Description: HTH_ARAC Location: 1180449-1180692 bp Feature: domain Description: HTH_ARAC Location: 1 1 80449-1 1 80692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lpd (COG1249), PBP2_HisJ_LAO (cd13703), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MhpC (COG0596), Arabinose_bd (pfam12625), HTH_ARAC (smart00342)

Seq: CP039700.1 Vibrio cyclitrophicus strain ECSMB14105 chromosome 1, complete sequence (3336445 bp)
Overview 1 RT 1: 1926580-1935723 bp Neighborhood of RT #1 [1926580, 1935728] RVT-UG8 RVT-UG3 pheT pheS Feature: gene Location: 1926580-1927509 bp Feature: gene Location: 1927733-1927945 bp Feature: gene Location: 1928375-1930405 bp Ori: QCI71158.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1928990-1929437 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 192 8990-192 9437 bp Feature: gene Location: 1930398-1931747 bp Ori: QCI71159.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1930854-1931331 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1930854-1931331 bp Feature: gene Location: 1932321-1934726 bp Ori: QCI71160.1 Gene: pheT Feature: domain Description: pheT Location: 1932324-1934724 bp Feature: domain Description: pheT Location: 1932 32 4-193472 4 bp Feature: gene Location: 1934745-1935728 bp Ori: QCI72356.1 Gene: pheS Feature: domain Description: pheS Location: 1934748-1935723 bp Feature: domain Description: pheS Location: 1934748-193572 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, pheT (PRK09616), pheS (TIGR00468)