myRT

myRT report for GCA_005155285.1_ASM515528v1

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Seq: CP039722.1 Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence (359550 bp)
Overview 1 RT 1: 115062-120846 bp Neighborhood of RT #1 [115062, 120941] Spr RVT-GII Intron_maturas2 HNHc Lysozyme_like TraC-F-type TraC-F-type Feature: gene Location: 115062-115334 bp Feature: gene Location: 115355-115831 bp Ori: QCJ54057.1 Feature: domain Description: Spr Location: 115433-115808 bp Feature: domain Description: Spr Location: 1 1 5433-1 1 5808 bp Feature: gene Location: 115943-117766 bp Ori: QCJ54236.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116207-117041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6207-1 1 7041 bp Feature: domain Description: Intron_maturas2 Location: 117113-117416 bp Feature: domain Description: Intron_maturas2 Location: 1 1 71 1 3-1 1 741 6 bp Feature: domain Description: HNHc Note: nucleases Location: 117587-117740 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 7587-1 1 7740 bp Feature: gene Location: 118337-118999 bp Ori: QCJ54058.1 Feature: domain Description: Lysozyme_like Location: 118526-118988 bp Feature: domain Description: Lysozyme_like Location: 1 1 8526-1 1 8988 bp Feature: gene Location: 119004-120941 bp Ori: QCJ54059.1 Feature: domain Description: TraC-F-type Location: 119721-119955 bp Feature: domain Description: TraC-F-type Location: 1 1 9721 -1 1 9955 bp Feature: domain Description: TraC-F-type Location: 120525-120846 bp Feature: domain Description: TraC-F-type Location: 1 20525-1 20846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), TraC-F-type (TIGR02746)

Seq: CP039724.1 Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence (235426 bp)
Overview 1 RT 1: 222843-229479 bp Neighborhood of RT #1 [222843, 229479] YpsA Macro_Poa1p_like RVT-GII GIIM RVT-Retrons ligA Feature: gene Location: 222843-223829 bp Ori: QCJ54898.1 Feature: domain Description: YpsA Location: 222864-223338 bp Feature: domain Description: YpsA Location: 2 2 2 864-2 2 3338 bp Feature: domain Description: Macro_Poa1p_like Location: 223356-223791 bp Feature: domain Description: Macro_Poa1p_like Location: 2 2 3356-2 2 3791 bp Feature: gene Location: 223889-224278 bp Feature: gene Location: 224336-225598 bp Ori: QCJ54900.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224540-225197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 4540-2 2 5197 bp Feature: domain Description: GIIM Note: maturase Location: 225278-225506 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 52 78-2 2 5506 bp Feature: gene Location: 226121-226990 bp Ori: QCJ54901.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226499-226967 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 6499-2 2 6967 bp Feature: gene Location: 227208-229178 bp Ori: QCJ54902.1 Gene: ligA Feature: domain Description: ligA Location: 227223-229173 bp Feature: domain Description: ligA Location: 2 2 72 2 3-2 2 9173 bp Feature: gene Location: 229240-229479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YpsA, Macro_Poa1p_like, RVT-GII, GIIM (pfam08388), RVT-Retrons, ligA (PRK14351)