myRT

myRT report for GCA_005160065.1_ASM516006v1

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Seq: CP038860.1 Geobacillus kaustophilus NBRC 102445 chromosome, complete genome (3670957 bp)
Overview 1 RT 1: 28854-33550 bp 2 RT 2: 100749-106403 bp 3 RT 3: 158129-161718 bp 4 RT 4: 468619-473575 bp 5 RT 5: 544207-549428 bp 6 RT 6: 799064-802508 bp 7 RT 7: 844551-849287 bp 8 RT 8: 1009273-1017695 bp 9 RT 9: 1209722-1225982 bp 10 RT 10: 1426106-1430522 bp 11 RT 11: 1610909-1615544 bp 12 RT 12: 1970028-1977212 bp 13 RT 13: 1988189-1993179 bp 14 RT 14: 2034715-2037772 bp 15 RT 15: 2051077-2056146 bp 16 RT 16: 2191127-2196650 bp 17 RT 17: 2332050-2335724 bp 18 RT 18: 2422300-2426800 bp 19 RT 19: 2706329-2710493 bp 20 RT 20: 2809138-2811887 bp 21 RT 21: 2912841-2918522 bp 22 RT 22: 2933828-2939738 bp 23 RT 23: 3073621-3077258 bp 24 RT 24: 3146744-3152015 bp 25 RT 25: 3246688-3254185 bp 26 RT 26: 3290484-3294019 bp 27 RT 27: 3419971-3425026 bp 28 RT 28: 3503485-3510708 bp 29 RT 29: 3655645-3659145 bp Neighborhood of RT #1 [28854, 33579] RVT-GII GIIM sufB Neighborhood of RT #2 [100749, 106414] PnbA RVT-GII GIIM eno Neighborhood of RT #3 [158129, 161718] RelE RVT-GII GIIM Neighborhood of RT #4 [468619, 473580] Tdk RVT-GII GIIM RVT-GII GIIM rpmE Neighborhood of RT #5 [544207, 549436] PRK12412 nitrilase_Rim1_like RVT-GII GIIM Na_Pro_sym Neighborhood of RT #6 [799064, 802510] DsbA_FrnE RVT-GII GIIM DinB BaeS Neighborhood of RT #7 [844551, 849287] T6A_TsaD_YgjD DUF772 RVT-GII GIIM Neighborhood of RT #8 [1009273, 1017751] hsdR HsdR RVT-GII GIIM AlsT TMR_SDR_a Neighborhood of RT #9 [1209722, 1226020] PRK01663 RVT-GII GIIM ARA1 YugP TlyC RVT-GII GIIM RluA DUF5365 PGM2 RVT-GII GIIM YhdB DUF4203 Neighborhood of RT #10 [1426106, 1430587] NarK RVT-GII GIIM Crp Neighborhood of RT #11 [1610909, 1615591] RsgI_N RVT-GII GIIM SASP MFS_YfmO_like Neighborhood of RT #12 [1970028, 1977214] PRK00549 recA RVT-GII HNHc recA RNase_Y Neighborhood of RT #13 [1988189, 1993202] mutL RVT-GII GIIM mutL PRK13914 PRK13914 LysM PRK13914 Neighborhood of RT #14 [2034715, 2037772] DUF2564 RVT-GII GIIM CspC Neighborhood of RT #15 [2051077, 2056187] YjiH RVT-GII GIIM mscL Sulf_transp Neighborhood of RT #16 [2191127, 2197084] Php RVT-GII GIIM DPM1_like_bac Neighborhood of RT #17 [2332050, 2335741] TM_PBP1_LivM_like RVT-GII GIIM LivG Neighborhood of RT #18 [2422300, 2426823] PRK00220 RsmB RsmF_methylt_CI Methyltranf_PUA RVT-GII GIIM DUF2140 Neighborhood of RT #19 [2706329, 2710498] ALDH_y4uC PRK06224 RVT-GII GIIM PRK06224 Neighborhood of RT #20 [2809138, 2811895] CsgA RVT-GII GIIM YppG Neighborhood of RT #21 [2912841, 2918530] HK_WalK OmpR RVT-GII GIIM cytochr_II_ccsB Neighborhood of RT #22 [2933828, 2939776] YpuA lysA RVT-GII GIIM GerA Neighborhood of RT #23 [3073621, 3077260] Sigma70_r4_2 YceG RVT-GII GIIM PRK14238 Neighborhood of RT #24 [3146744, 3152023] spore_ytvI DedA RVT-GII GIIM gltP Neighborhood of RT #25 [3246688, 3254185] PilW RVT-GII GIIM Neighborhood of RT #26 [3290484, 3294051] PRK00865 MarR RVT-GII GIIM HTH_LUXR Neighborhood of RT #27 [3419971, 3425037] PRK00180 YtxK RVT-GII GIIM tpx Neighborhood of RT #28 [3503485, 3510708] AdcA YncE YncE YncE MauG MauG RVT-GII GIIM Neighborhood of RT #29 [3655645, 3659156] YncA MFS_YfmO_like RVT-GII GIIM SspH Feature: gene Location: 28854-29773 bp Feature: gene Location: 29901-30071 bp Feature: gene Location: 30159-31418 bp Ori: QCK80929.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30357-30975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30357-30975 bp Feature: domain Description: GIIM Note: maturase Location: 31023-31236 bp Feature: domain Description: GIIM Note: maturase Location: 31 023-31 236 bp Feature: gene Location: 31717-31902 bp Feature: gene Location: 32182-33579 bp Ori: QCK80931.1 Gene: sufB Feature: domain Description: sufB Location: 32212-33550 bp Feature: domain Description: sufB Location: 3221 2-33550 bp Feature: gene Location: 100749-102245 bp Ori: QCK80996.1 Feature: domain Description: PnbA Location: 100761-102237 bp Feature: domain Description: PnbA Location: 1 00761 -1 02237 bp Feature: gene Location: 102927-103082 bp Feature: gene Location: 103271-104530 bp Ori: QCK80997.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103469-104087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03469-1 04087 bp Feature: domain Description: GIIM Note: maturase Location: 104135-104348 bp Feature: domain Description: GIIM Note: maturase Location: 1 041 35-1 04348 bp Feature: gene Location: 104829-105014 bp Feature: gene Location: 105122-106414 bp Ori: QCK80999.1 Feature: domain Description: eno Location: 105134-106403 bp Feature: domain Description: eno Location: 1 051 34-1 06403 bp Feature: gene Location: 158129-158389 bp Ori: QCK81045.1 Feature: domain Description: RelE Location: 158144-158387 bp Feature: domain Description: RelE Location: 1 581 44-1 58387 bp Feature: gene Location: 158358-158618 bp Feature: gene Location: 158772-160031 bp Ori: QCK81047.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158970-159588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58970-1 59588 bp Feature: domain Description: GIIM Note: maturase Location: 159636-159849 bp Feature: domain Description: GIIM Note: maturase Location: 1 59636-1 59849 bp Feature: gene Location: 160330-160515 bp Feature: gene Location: 161644-161718 bp Feature: gene Location: 468619-468801 bp Feature: gene Location: 468819-469442 bp Ori: QCK81299.1 Feature: domain Description: Tdk Location: 468837-469404 bp Feature: domain Description: Tdk Location: 468837-469404 bp Feature: gene Location: 469633-470892 bp Ori: QCK81300.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 469831-470449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 469831 -470449 bp Feature: domain Description: GIIM Note: maturase Location: 470497-470710 bp Feature: domain Description: GIIM Note: maturase Location: 470497-47071 0 bp Feature: gene Location: 471191-471376 bp Feature: gene Location: 471520-472779 bp Ori: QCK81302.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471718-472336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 71 8-472336 bp Feature: domain Description: GIIM Note: maturase Location: 472384-472597 bp Feature: domain Description: GIIM Note: maturase Location: 472384-472597 bp Feature: gene Location: 473078-473263 bp Feature: gene Location: 473380-473580 bp Ori: QCK81304.1 Gene: rpmE Feature: domain Description: rpmE Location: 473383-473575 bp Feature: domain Description: rpmE Location: 473383-473575 bp Feature: gene Location: 544207-545022 bp Ori: QCK81366.1 Feature: domain Description: PRK12412 Location: 544216-545017 bp Feature: domain Description: PRK1 241 2 Location: 54421 6-54501 7 bp Feature: gene Location: 545150-546037 bp Ori: QCK81367.1 Feature: domain Description: nitrilase_Rim1_like Location: 545183-546008 bp Feature: domain Description: nitrilase_Rim1 _like Location: 5451 83-546008 bp Feature: gene Location: 546118-547377 bp Ori: QCK81368.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 546316-546934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54631 6-546934 bp Feature: domain Description: GIIM Note: maturase Location: 546982-547195 bp Feature: domain Description: GIIM Note: maturase Location: 546982-5471 95 bp Feature: gene Location: 547676-547861 bp Feature: gene Location: 547979-549436 bp Ori: QCK81370.1 Gene: putP Feature: domain Description: Na_Pro_sym Location: 547985-549428 bp Feature: domain Description: Na_Pro_sym Location: 547985-549428 bp Feature: gene Location: 799064-799771 bp Ori: QCK81590.1 Feature: domain Description: DsbA_FrnE Location: 799073-799679 bp Feature: domain Description: DsbA_FrnE Location: 799073-799679 bp Feature: gene Location: 799898-800083 bp Feature: gene Location: 800382-801641 bp Ori: QCK81592.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800580-801198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800580-801 1 98 bp Feature: domain Description: GIIM Note: maturase Location: 801246-801459 bp Feature: domain Description: GIIM Note: maturase Location: 801 246-801 459 bp Feature: gene Location: 801769-802233 bp Ori: QCK81593.1 Feature: domain Description: DinB Location: 801787-802213 bp Feature: domain Description: DinB Location: 801 787-80221 3 bp Feature: gene Location: 802298-802510 bp Feature: domain Description: BaeS Location: 802301-802508 bp Feature: domain Description: BaeS Location: 802301 -802508 bp Feature: gene Location: 844551-845577 bp Gene: tsaD Feature: domain Description: T6A_TsaD_YgjD Location: 844572-845046 bp Feature: domain Description: T6A_TsaD_YgjD Location: 844572-845046 bp Feature: gene Location: 845643-847113 bp Feature: domain Description: DUF772 Location: 845823-846072 bp Feature: domain Description: DUF772 Location: 845823-846072 bp Feature: gene Location: 847213-848472 bp Ori: QCK81624.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847411-848029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84741 1 -848029 bp Feature: domain Description: GIIM Note: maturase Location: 848077-848290 bp Feature: domain Description: GIIM Note: maturase Location: 848077-848290 bp Feature: gene Location: 848771-848956 bp Feature: gene Location: 849092-849287 bp Feature: gene Location: 1009273-1012614 bp Ori: QCK81739.1 Feature: domain Description: hsdR Location: 1009282-1009831 bp Feature: domain Description: hsdR Location: 1 009282-1 009831 bp Feature: domain Description: HsdR Location: 1009858-1012522 bp Feature: domain Description: HsdR Location: 1 009858-1 01 2522 bp Feature: gene Location: 1013016-1013201 bp Feature: gene Location: 1013500-1014759 bp Ori: QCK81741.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013698-1014316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 3698-1 01 431 6 bp Feature: domain Description: GIIM Note: maturase Location: 1014364-1014577 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 4364-1 01 4577 bp Feature: gene Location: 1015152-1016621 bp Ori: QCK81742.1 Feature: domain Description: AlsT Location: 1015158-1016523 bp Feature: domain Description: AlsT Location: 1 01 51 58-1 01 6523 bp Feature: gene Location: 1016876-1017751 bp Ori: QCK81743.1 Feature: domain Description: TMR_SDR_a Location: 1016885-1017695 bp Feature: domain Description: TMR_SDR_a Location: 1 01 6885-1 01 7695 bp Feature: gene Location: 1209722-1210984 bp Ori: QCK81919.1 Feature: domain Description: PRK01663 Location: 1209731-1210952 bp Feature: domain Description: PRK01 663 Location: 1 209731 -1 21 0952 bp Feature: gene Location: 1211209-1211394 bp Feature: gene Location: 1211693-1212952 bp Ori: QCK81921.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1211891-1212509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 1 891 -1 21 2509 bp Feature: domain Description: GIIM Note: maturase Location: 1212557-1212770 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 2557-1 21 2770 bp Feature: gene Location: 1213154-1213981 bp Ori: QCK81922.1 Feature: domain Description: ARA1 Location: 1213175-1213973 bp Feature: domain Description: ARA1 Location: 1 21 31 75-1 21 3973 bp Feature: gene Location: 1214129-1214821 bp Ori: QCK81923.1 Feature: domain Description: YugP Location: 1214132-1214801 bp Feature: domain Description: YugP Location: 1 21 41 32-1 21 4801 bp Feature: gene Location: 1214933-1216273 bp Ori: QCK81924.1 Feature: domain Description: TlyC Location: 1214942-1216235 bp Feature: domain Description: TlyC Location: 1 21 4942-1 21 6235 bp Feature: gene Location: 1216372-1216557 bp Feature: gene Location: 1216856-1218115 bp Ori: QCK81926.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1217054-1217672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 7054-1 21 7672 bp Feature: domain Description: GIIM Note: maturase Location: 1217720-1217933 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 7720-1 21 7933 bp Feature: gene Location: 1218235-1219134 bp Ori: QCK81927.1 Feature: domain Description: RluA Location: 1218295-1219093 bp Feature: domain Description: RluA Location: 1 21 8295-1 21 9093 bp Feature: gene Location: 1219273-1219671 bp Ori: QCK81928.1 Feature: domain Description: DUF5365 Location: 1219276-1219621 bp Feature: domain Description: DUF5365 Location: 1 21 9276-1 21 9621 bp Feature: gene Location: 1221642-1223399 bp Ori: QCK81932.1 Feature: domain Description: PGM2 Location: 1221765-1223334 bp Feature: domain Description: PGM2 Location: 1 221 765-1 223334 bp Feature: gene Location: 1223515-1223700 bp Feature: gene Location: 1223999-1225258 bp Ori: QCK81934.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224197-1224815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2241 97-1 22481 5 bp Feature: domain Description: GIIM Note: maturase Location: 1224863-1225076 bp Feature: domain Description: GIIM Note: maturase Location: 1 224863-1 225076 bp Feature: gene Location: 1225334-1225591 bp Ori: QCK81935.1 Feature: domain Description: YhdB Location: 1225340-1225544 bp Feature: domain Description: YhdB Location: 1 225340-1 225544 bp Feature: gene Location: 1225772-1226020 bp Ori: QCK84166.1 Feature: domain Description: DUF4203 Location: 1225835-1225982 bp Feature: domain Description: DUF4203 Location: 1 225835-1 225982 bp Feature: gene Location: 1426106-1427281 bp Ori: QCK82110.1 Feature: domain Description: NarK Location: 1426112-1427252 bp Feature: domain Description: NarK Location: 1 4261 1 2-1 427252 bp Feature: gene Location: 1427407-1427592 bp Feature: gene Location: 1427891-1429150 bp Ori: QCK82112.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1428089-1428707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 428089-1 428707 bp Feature: domain Description: GIIM Note: maturase Location: 1428755-1428968 bp Feature: domain Description: GIIM Note: maturase Location: 1 428755-1 428968 bp Feature: gene Location: 1429464-1429730 bp Feature: gene Location: 1429889-1430587 bp Ori: QCK82113.1 Feature: domain Description: Crp Location: 1429916-1430522 bp Feature: domain Description: Crp Location: 1 42991 6-1 430522 bp Feature: gene Location: 1610909-1611967 bp Ori: QCK82270.1 Feature: domain Description: RsgI_N Location: 1610921-1611071 bp Feature: domain Description: RsgI_N Location: 1 61 0921 -1 61 1 071 bp Feature: gene Location: 1612058-1612243 bp Feature: gene Location: 1612542-1613801 bp Ori: QCK82272.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1612740-1613358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 2740-1 61 3358 bp Feature: domain Description: GIIM Note: maturase Location: 1613406-1613619 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 3406-1 61 361 9 bp Feature: gene Location: 1613867-1614067 bp Ori: QCK82273.1 Feature: domain Description: SASP Location: 1613885-1614047 bp Feature: domain Description: SASP Location: 1 61 3885-1 61 4047 bp Feature: gene Location: 1614344-1615591 bp Ori: QCK82274.1 Feature: domain Description: MFS_YfmO_like Location: 1614407-1615544 bp Feature: domain Description: MFS_YfmO_like Location: 1 61 4407-1 61 5544 bp Feature: gene Location: 1970028-1971272 bp Ori: QCK82595.1 Feature: domain Description: PRK00549 Location: 1970034-1971261 bp Feature: domain Description: PRK00549 Location: 1 970034-1 971 261 bp Feature: gene Location: 1971450-1971737 bp Feature: domain Description: recA Location: 1971456-1971738 bp Feature: domain Description: recA Location: 1 971 456-1 971 738 bp Feature: gene Location: 1972574-1974394 bp Ori: QCK82596.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1972829-1973540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 972829-1 973540 bp Feature: domain Description: HNHc Note: nucleases Location: 1974137-1974302 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9741 37-1 974302 bp Feature: gene Location: 1974440-1975282 bp Ori: QCK82597.1 Gene: recA Feature: domain Description: recA Location: 1974530-1975241 bp Feature: domain Description: recA Location: 1 974530-1 975241 bp Feature: gene Location: 1975658-1977214 bp Ori: QCK82598.1 Gene: rny Feature: domain Description: RNase_Y Location: 1975676-1977212 bp Feature: domain Description: RNase_Y Location: 1 975676-1 97721 2 bp Feature: gene Location: 1988189-1989520 bp Gene: mutL Feature: domain Description: mutL Location: 1988198-1989404 bp Feature: domain Description: mutL Location: 1 9881 98-1 989404 bp Feature: gene Location: 1989591-1989776 bp Feature: gene Location: 1990075-1991334 bp Ori: QCK82609.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1990273-1990891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 990273-1 990891 bp Feature: domain Description: GIIM Note: maturase Location: 1990939-1991152 bp Feature: domain Description: GIIM Note: maturase Location: 1 990939-1 991 1 52 bp Feature: gene Location: 1991411-1991968 bp Feature: domain Description: mutL Location: 1991414-1991960 bp Feature: domain Description: mutL Location: 1 991 41 4-1 991 960 bp Feature: gene Location: 1992177-1993202 bp Ori: QCK82610.1 Feature: domain Description: PRK13914 Location: 1992195-1992405 bp Feature: domain Description: PRK1 391 4 Location: 1 9921 95-1 992405 bp Feature: domain Description: PRK13914 Location: 1992408-1992555 bp Feature: domain Description: PRK1 391 4 Location: 1 992408-1 992555 bp Feature: domain Description: LysM Location: 1992615-1992747 bp Feature: domain Description: LysM Location: 1 99261 5-1 992747 bp Feature: domain Description: PRK13914 Location: 1992780-1993179 bp Feature: domain Description: PRK1 391 4 Location: 1 992780-1 9931 79 bp Feature: gene Location: 2034715-2034984 bp Ori: QCK82648.1 Feature: domain Description: DUF2564 Location: 2034748-2034982 bp Feature: domain Description: DUF2564 Location: 2034748-2034982 bp Feature: gene Location: 2035147-2035332 bp Feature: gene Location: 2035631-2036890 bp Ori: QCK82650.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2035829-2036447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2035829-2036447 bp Feature: domain Description: GIIM Note: maturase Location: 2036495-2036708 bp Feature: domain Description: GIIM Note: maturase Location: 2036495-2036708 bp Feature: gene Location: 2037000-2037200 bp Ori: QCK82651.1 Feature: domain Description: CspC Location: 2037003-2037195 bp Feature: domain Description: CspC Location: 2037003-20371 95 bp Feature: gene Location: 2037521-2037772 bp Feature: gene Location: 2051077-2052406 bp Feature: domain Description: YjiH Location: 2051134-2051359 bp Feature: domain Description: YjiH Location: 2051 1 34-2051 359 bp Feature: gene Location: 2052615-2052800 bp Feature: gene Location: 2053099-2054358 bp Ori: QCK82663.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053297-2053915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053297-205391 5 bp Feature: domain Description: GIIM Note: maturase Location: 2053963-2054176 bp Feature: domain Description: GIIM Note: maturase Location: 2053963-20541 76 bp Feature: gene Location: 2054424-2054819 bp Ori: QCK82664.1 Gene: mscL Feature: domain Description: mscL Location: 2054427-2054811 bp Feature: domain Description: mscL Location: 2054427-205481 1 bp Feature: gene Location: 2054967-2056187 bp Ori: QCK82665.1 Feature: domain Description: Sulf_transp Location: 2055162-2056146 bp Feature: domain Description: Sulf_transp Location: 20551 62-20561 46 bp Feature: gene Location: 2191127-2192107 bp Ori: QCK82775.1 Feature: domain Description: Php Location: 2191139-2192102 bp Feature: domain Description: Php Location: 21 91 1 39-21 921 02 bp Feature: gene Location: 2192465-2192650 bp Feature: gene Location: 2192949-2194208 bp Ori: QCK82777.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2193147-2193765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 931 47-21 93765 bp Feature: domain Description: GIIM Note: maturase Location: 2193813-2194026 bp Feature: domain Description: GIIM Note: maturase Location: 21 9381 3-21 94026 bp Feature: gene Location: 2194380-2196060 bp Feature: gene Location: 2196062-2197084 bp Ori: QCK82778.1 Feature: domain Description: DPM1_like_bac Location: 2196086-2196650 bp Feature: domain Description: DPM1 _like_bac Location: 21 96086-21 96650 bp Feature: gene Location: 2332050-2332973 bp Feature: domain Description: TM_PBP1_LivM_like Location: 2332164-2332962 bp Feature: domain Description: TM_PBP1 _LivM_like Location: 23321 64-2332962 bp Feature: gene Location: 2333043-2333228 bp Feature: gene Location: 2333527-2334786 bp Ori: QCK82905.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2333725-2334343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2333725-2334343 bp Feature: domain Description: GIIM Note: maturase Location: 2334391-2334604 bp Feature: domain Description: GIIM Note: maturase Location: 2334391 -2334604 bp Feature: gene Location: 2334855-2334974 bp Feature: gene Location: 2334977-2335741 bp Ori: QCK82906.1 Feature: domain Description: LivG Location: 2334983-2335724 bp Feature: domain Description: LivG Location: 2334983-2335724 bp Feature: gene Location: 2422300-2422893 bp Ori: QCK82979.1 Gene: plsY Feature: domain Description: PRK00220 Location: 2422306-2422876 bp Feature: domain Description: PRK00220 Location: 2422306-2422876 bp Feature: gene Location: 2422922-2424286 bp Ori: QCK82980.1 Feature: domain Description: RsmB Location: 2422931-2423828 bp Feature: domain Description: RsmB Location: 2422931 -2423828 bp Feature: domain Description: RsmF_methylt_CI Location: 2423903-2424086 bp Feature: domain Description: RsmF_methylt_CI Location: 2423903-2424086 bp Feature: domain Description: Methyltranf_PUA Location: 2424143-2424281 bp Feature: domain Description: Methyltranf_PUA Location: 24241 43-2424281 bp Feature: gene Location: 2424396-2425655 bp Ori: QCK82981.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2424594-2425212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2424594-242521 2 bp Feature: domain Description: GIIM Note: maturase Location: 2425260-2425473 bp Feature: domain Description: GIIM Note: maturase Location: 2425260-2425473 bp Feature: gene Location: 2425954-2426139 bp Feature: gene Location: 2426248-2426823 bp Ori: QCK82983.1 Feature: domain Description: DUF2140 Location: 2426257-2426800 bp Feature: domain Description: DUF21 40 Location: 2426257-2426800 bp Feature: gene Location: 2706329-2707759 bp Ori: QCK83222.1 Feature: domain Description: ALDH_y4uC Location: 2706392-2707739 bp Feature: domain Description: ALDH_y4uC Location: 2706392-2707739 bp Feature: gene Location: 2707769-2708326 bp Feature: domain Description: PRK06224 Location: 2707775-2708318 bp Feature: domain Description: PRK06224 Location: 2707775-270831 8 bp Feature: gene Location: 2708400-2709659 bp Ori: QCK83223.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2708598-2709216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2708598-270921 6 bp Feature: domain Description: GIIM Note: maturase Location: 2709264-2709477 bp Feature: domain Description: GIIM Note: maturase Location: 2709264-2709477 bp Feature: gene Location: 2709958-2710143 bp Feature: gene Location: 2710214-2710498 bp Feature: domain Description: PRK06224 Location: 2710253-2710493 bp Feature: domain Description: PRK06224 Location: 271 0253-271 0493 bp Feature: gene Location: 2809138-2809323 bp Feature: gene Location: 2809323-2809577 bp Ori: QCK84252.1 Feature: domain Description: CsgA Location: 2809326-2809575 bp Feature: domain Description: CsgA Location: 2809326-2809575 bp Feature: gene Location: 2809654-2810913 bp Ori: QCK83302.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2809852-2810470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2809852-281 0470 bp Feature: domain Description: GIIM Note: maturase Location: 2810518-2810731 bp Feature: domain Description: GIIM Note: maturase Location: 281 051 8-281 0731 bp Feature: gene Location: 2811212-2811397 bp Feature: gene Location: 2811548-2811895 bp Ori: QCK83304.1 Feature: domain Description: YppG Location: 2811611-2811887 bp Feature: domain Description: YppG Location: 281 1 61 1 -281 1 887 bp Feature: gene Location: 2912841-2914634 bp Ori: QCK83405.1 Feature: domain Description: HK_WalK Location: 2912853-2914611 bp Feature: domain Description: HK_WalK Location: 291 2853-291 461 1 bp Feature: gene Location: 2914634-2915380 bp Ori: QCK83406.1 Feature: domain Description: OmpR Location: 2914682-2915369 bp Feature: domain Description: OmpR Location: 291 4682-291 5369 bp Feature: gene Location: 2915485-2916744 bp Ori: QCK83407.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2915683-2916301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 5683-291 6301 bp Feature: domain Description: GIIM Note: maturase Location: 2916349-2916562 bp Feature: domain Description: GIIM Note: maturase Location: 291 6349-291 6562 bp Feature: gene Location: 2917043-2917228 bp Feature: gene Location: 2917343-2918530 bp Ori: QCK84262.1 Gene: ccsB Feature: domain Description: cytochr_II_ccsB Location: 2917487-2918522 bp Feature: domain Description: cytochr_II_ccsB Location: 291 7487-291 8522 bp Feature: gene Location: 2933828-2934706 bp Ori: QCK83426.1 Feature: domain Description: YpuA Location: 2933864-2934695 bp Feature: domain Description: YpuA Location: 2933864-2934695 bp Feature: gene Location: 2934778-2936097 bp Ori: QCK83427.1 Gene: lysA Feature: domain Description: lysA Location: 2934805-2936068 bp Feature: domain Description: lysA Location: 2934805-2936068 bp Feature: gene Location: 2936428-2937687 bp Ori: QCK83428.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2936626-2937244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2936626-2937244 bp Feature: domain Description: GIIM Note: maturase Location: 2937292-2937505 bp Feature: domain Description: GIIM Note: maturase Location: 2937292-2937505 bp Feature: gene Location: 2937986-2938171 bp Feature: gene Location: 2938298-2939776 bp Ori: QCK83430.1 Feature: domain Description: GerA Location: 2938382-2939738 bp Feature: domain Description: GerA Location: 2938382-2939738 bp Feature: gene Location: 3073621-3073971 bp Ori: QCK83568.1 Feature: domain Description: Sigma70_r4_2 Location: 3073846-3073966 bp Feature: domain Description: Sigma70_r4_2 Location: 3073846-3073966 bp Feature: gene Location: 3073968-3074417 bp Ori: QCK83569.1 Feature: domain Description: YceG Location: 3074187-3074406 bp Feature: domain Description: YceG Location: 30741 87-3074406 bp Feature: gene Location: 3074491-3075750 bp Ori: QCK83570.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3074689-3075307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3074689-3075307 bp Feature: domain Description: GIIM Note: maturase Location: 3075355-3075568 bp Feature: domain Description: GIIM Note: maturase Location: 3075355-3075568 bp Feature: gene Location: 3076050-3076235 bp Feature: gene Location: 3076451-3077260 bp Ori: QCK84268.1 Feature: domain Description: PRK14238 Location: 3076493-3077258 bp Feature: domain Description: PRK1 4238 Location: 3076493-3077258 bp Feature: gene Location: 3146744-3147769 bp Ori: QCK83640.1 Gene: ytvI Feature: domain Description: spore_ytvI Location: 3146759-3147749 bp Feature: domain Description: spore_ytvI Location: 31 46759-31 47749 bp Feature: gene Location: 3147850-3148461 bp Ori: QCK83641.1 Feature: domain Description: DedA Location: 3147874-3148438 bp Feature: domain Description: DedA Location: 31 47874-31 48438 bp Feature: gene Location: 3148605-3149864 bp Ori: QCK83642.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3148803-3149421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 48803-31 49421 bp Feature: domain Description: GIIM Note: maturase Location: 3149469-3149682 bp Feature: domain Description: GIIM Note: maturase Location: 31 49469-31 49682 bp Feature: gene Location: 3150163-3150348 bp Feature: gene Location: 3150755-3152023 bp Ori: QCK83644.1 Feature: domain Description: gltP Location: 3150764-3152015 bp Feature: domain Description: gltP Location: 31 50764-31 5201 5 bp Feature: gene Location: 3246688-3247257 bp Ori: QCK83736.1 Feature: domain Description: PilW Location: 3246694-3246835 bp Feature: domain Description: PilW Location: 3246694-3246835 bp Feature: gene Location: 3247270-3248991 bp Feature: gene Location: 3249087-3250346 bp Ori: QCK83738.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3249285-3249903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3249285-3249903 bp Feature: domain Description: GIIM Note: maturase Location: 3249951-3250164 bp Feature: domain Description: GIIM Note: maturase Location: 3249951 -32501 64 bp Feature: gene Location: 3250645-3250830 bp Feature: gene Location: 3250945-3254185 bp Feature: gene Location: 3290484-3291278 bp Ori: QCK83771.1 Gene: racE Feature: domain Description: PRK00865 Location: 3290493-3291243 bp Feature: domain Description: PRK00865 Location: 3290493-3291 243 bp Feature: gene Location: 3291288-3291731 bp Ori: QCK83772.1 Feature: domain Description: MarR Location: 3291354-3291714 bp Feature: domain Description: MarR Location: 3291 354-3291 71 4 bp Feature: gene Location: 3291931-3293190 bp Ori: QCK83773.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3292129-3292747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32921 29-3292747 bp Feature: domain Description: GIIM Note: maturase Location: 3292795-3293008 bp Feature: domain Description: GIIM Note: maturase Location: 3292795-3293008 bp Feature: gene Location: 3293489-3293674 bp Feature: gene Location: 3293827-3294051 bp Ori: QCK83775.1 Feature: domain Description: HTH_LUXR Location: 3293857-3294019 bp Feature: domain Description: HTH_LUXR Location: 3293857-329401 9 bp Feature: gene Location: 3419971-3421161 bp Ori: QCK83887.1 Feature: domain Description: PRK00180 Location: 3419980-3421156 bp Feature: domain Description: PRK001 80 Location: 341 9980-3421 1 56 bp Feature: gene Location: 3421541-3422530 bp Ori: QCK83888.1 Feature: domain Description: YtxK Location: 3421601-3422516 bp Feature: domain Description: YtxK Location: 3421 601 -342251 6 bp Feature: gene Location: 3422690-3423949 bp Ori: QCK83889.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3422888-3423506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3422888-3423506 bp Feature: domain Description: GIIM Note: maturase Location: 3423554-3423767 bp Feature: domain Description: GIIM Note: maturase Location: 3423554-3423767 bp Feature: gene Location: 3424248-3424433 bp Feature: gene Location: 3424537-3425037 bp Ori: QCK83891.1 Feature: domain Description: tpx Location: 3424540-3425026 bp Feature: domain Description: tpx Location: 3424540-3425026 bp Feature: gene Location: 3503485-3504471 bp Ori: QCK83968.1 Feature: domain Description: AdcA Location: 3503590-3504466 bp Feature: domain Description: AdcA Location: 3503590-3504466 bp Feature: gene Location: 3504688-3506646 bp Ori: QCK83969.1 Feature: domain Description: YncE Location: 3504805-3504976 bp Feature: domain Description: YncE Location: 3504805-3504976 bp Feature: domain Description: YncE Location: 3504988-3505390 bp Feature: domain Description: YncE Location: 3504988-3505390 bp Feature: domain Description: YncE Location: 3505543-3505780 bp Feature: domain Description: YncE Location: 3505543-3505780 bp Feature: domain Description: MauG Location: 3505822-3506083 bp Feature: domain Description: MauG Location: 3505822-3506083 bp Feature: domain Description: MauG Location: 3506173-3506593 bp Feature: domain Description: MauG Location: 35061 73-3506593 bp Feature: gene Location: 3506773-3508032 bp Ori: QCK83970.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3506971-3507589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3506971 -3507589 bp Feature: domain Description: GIIM Note: maturase Location: 3507637-3507850 bp Feature: domain Description: GIIM Note: maturase Location: 3507637-3507850 bp Feature: gene Location: 3508331-3508516 bp Feature: gene Location: 3508630-3510708 bp Feature: gene Location: 3655645-3656133 bp Ori: QCK84289.1 Feature: domain Description: YncA Location: 3655651-3656128 bp Feature: domain Description: YncA Location: 3655651 -36561 28 bp Feature: gene Location: 3656245-3656818 bp Feature: domain Description: MFS_YfmO_like Location: 3656266-3656482 bp Feature: domain Description: MFS_YfmO_like Location: 3656266-3656482 bp Feature: gene Location: 3656897-3658156 bp Ori: QCK84096.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3657095-3657713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3657095-365771 3 bp Feature: domain Description: GIIM Note: maturase Location: 3657761-3657974 bp Feature: domain Description: GIIM Note: maturase Location: 3657761 -3657974 bp Feature: gene Location: 3658455-3658640 bp Feature: gene Location: 3658968-3659156 bp Ori: QCK84098.1 Feature: domain Description: SspH Location: 3658971-3659145 bp Feature: domain Description: SspH Location: 3658971 -36591 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), sufB (TIGR01980), PnbA (COG2272), eno (TIGR01060), RelE (pfam06296), Tdk (COG1435), rpmE (PRK00528), PRK12412 (bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase), nitrilase_Rim1_like (cd07574)
Na_Pro_sym (TIGR02121), DsbA_FrnE (cd03024), DinB (pfam05163), BaeS (COG0642), T6A_TsaD_YgjD (TIGR03723), DUF772 (pfam05598), hsdR (TIGR00348), HsdR (COG4096), AlsT (COG1115), TMR_SDR_a (cd05269)
PRK01663 (C4-dicarboxylate transporter DctA; Reviewed), ARA1 (COG0656), YugP (COG2738), TlyC (COG1253), RluA (COG0564), DUF5365 (pfam17326), PGM2 (cd05799), YhdB (pfam14148), DUF4203 (pfam13886), NarK (COG2223)
Crp (pfam00325), RsgI_N (pfam12791), SASP (pfam00269), MFS_YfmO_like (cd17474), PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), HNHc (smart00507), RNase_Y (TIGR03319), mutL (PRK00095), PRK13914 (invasion associated endopeptidase)
LysM (smart00257), DUF2564 (pfam10819), CspC (COG1278), YjiH (COG3314), mscL (TIGR00220), Sulf_transp (pfam04143), Php (COG1735), DPM1_like_bac (cd04187), TM_PBP1_LivM_like (cd06581), LivG (COG0411)
PRK00220 (glycerol-3-phosphate 1-O-acyltransferase PlsY), RsmB (COG0144), RsmF_methylt_CI (pfam17126), Methyltranf_PUA (pfam13636), DUF2140 (pfam09911), ALDH_y4uC (cd07149), PRK06224 (citryl-CoA lyase), CsgA (pfam17334), YppG (pfam14179), HK_WalK (NF033092)
OmpR (COG0745), cytochr_II_ccsB (TIGR03144), YpuA (COG4086), lysA (TIGR01048), GerA (pfam03323), Sigma70_r4_2 (pfam08281), YceG (pfam02618), PRK14238 (phosphate transporter ATP-binding protein; Provisional), spore_ytvI (TIGR02872), DedA (COG0586)
gltP (PRK11283), PilW (pfam16074), PRK00865 (glutamate racemase; Provisional), MarR (pfam01047), HTH_LUXR (smart00421), PRK00180 (acetate kinase A/propionate kinase 2; Reviewed), YtxK (COG0827), tpx (PRK00522), AdcA (cd01017), YncE (COG3391)
MauG (COG1858), YncA (COG1247), SspH (pfam08141)