myRT

myRT report for GCA_005161605.1_ASM516160v1

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Seq: CP035438.1 Streptococcus pyogenes strain emm22.8 chromosome, complete genome (1950616 bp)
Overview 1 RT 1: 1496631-1509419 bp Neighborhood of RT #1 [1496631, 1509419] 7tmA_5-HT1A_invertebrates 7tmA_5-HT1A_invertebrates AAA_10 RVT-GII AAA_10 TcpE ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 1496631-1498808 bp Ori: QCK46163.1 Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 1496934-1497192 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 1 496934-1 4971 92 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 1498143-1498590 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 1 4981 43-1 498590 bp Feature: gene Location: 1498811-1499827 bp Feature: domain Description: AAA_10 Location: 1498892-1499795 bp Feature: domain Description: AAA_1 0 Location: 1 498892-1 499795 bp Feature: gene Location: 1499862-1501688 bp Ori: QCK46164.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1500162-1500861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5001 62-1 500861 bp Feature: gene Location: 1502433-1503938 bp Feature: domain Description: AAA_10 Location: 1503765-1503936 bp Feature: domain Description: AAA_1 0 Location: 1 503765-1 503936 bp Feature: gene Location: 1503922-1504428 bp Ori: QCK46165.1 Feature: domain Description: TcpE Location: 1504054-1504354 bp Feature: domain Description: TcpE Location: 1 504054-1 504354 bp Feature: gene Location: 1504403-1504900 bp Ori: QCK46166.1 Feature: domain Description: ArdA Location: 1504421-1504886 bp Feature: domain Description: ArdA Location: 1 504421 -1 504886 bp Feature: gene Location: 1505017-1505241 bp Feature: gene Location: 1505345-1507255 bp Ori: QCK46168.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1505678-1506416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 505678-1 50641 6 bp Feature: domain Description: HNHc Note: nucleases Location: 1506971-1507136 bp Feature: domain Description: HNHc Note: nucleases Location: 1 506971 -1 5071 36 bp Feature: gene Location: 1508039-1509244 bp Ori: QCK46169.1 Feature: domain Description: HTH_XRE Location: 1508084-1508228 bp Feature: domain Description: HTH_XRE Location: 1 508084-1 508228 bp Feature: domain Description: Rol_Rep_N Location: 1508255-1508522 bp Feature: domain Description: Rol_Rep_N Location: 1 508255-1 508522 bp Feature: domain Description: Rep_trans Location: 1508546-1509155 bp Feature: domain Description: Rep_trans Location: 1 508546-1 5091 55 bp Feature: gene Location: 1509267-1509419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7tmA_5-HT1A_invertebrates (cd15331), AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648), ArdA (pfam07275), HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)