myRT

myRT report for GCA_005163085.1_ASM516308v1

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Seq: CP035452.1 Streptococcus pyogenes strain emm123 chromosome, complete genome (1768816 bp)
Overview 1 RT 1: 1050562-1064367 bp Neighborhood of RT #1 [1050562, 1064375] HELICc RVT-GII HNHc COG4646 COG4646 COG2865 Feature: gene Location: 1050562-1051233 bp Feature: gene Location: 1051276-1053201 bp Feature: domain Description: HELICc Location: 1051408-1051753 bp Feature: domain Description: HELICc Location: 1 051 408-1 051 753 bp Feature: gene Location: 1053299-1055206 bp Ori: QCK69400.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053608-1054349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 053608-1 054349 bp Feature: domain Description: HNHc Note: nucleases Location: 1054940-1055075 bp Feature: domain Description: HNHc Note: nucleases Location: 1 054940-1 055075 bp Feature: gene Location: 1055934-1062756 bp Feature: domain Description: COG4646 Location: 1060089-1060842 bp Feature: domain Description: COG4646 Location: 1 060089-1 060842 bp Feature: domain Description: COG4646 Location: 1060950-1061013 bp Feature: domain Description: COG4646 Location: 1 060950-1 061 01 3 bp Feature: gene Location: 1062840-1064375 bp Ori: QCK69401.1 Feature: domain Description: COG2865 Location: 1062852-1064367 bp Feature: domain Description: COG2865 Location: 1 062852-1 064367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), RVT-GII, HNHc (smart00507), COG4646 (Adenine-specific DNA methylase, N12 class ), COG2865 (Predicted transcriptional regulator, contains HTH domain )