myRT

myRT report for GCA_005163705.1_ASM516370v1

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Seq: CP035433.1 Streptococcus pyogenes strain emm65 chromosome, complete genome (1789855 bp)
Overview 1 RT 1: 713312-722166 bp 2 RT 2: 741397-746248 bp Neighborhood of RT #1 [713312, 722166] VirD4 RVT-GII VirD4 SSB_OBF Maff2 RVT-GII HNHc Maff2 Neighborhood of RT #2 [741397, 746292] SSB_OBF Relaxase RVT-GII Intron_maturas2 Relaxase MobC Feature: gene Location: 713312-714088 bp Ori: QCK36988.1 Feature: domain Description: VirD4 Location: 713540-714068 bp Feature: domain Description: VirD4 Location: 71 3540-71 4068 bp Feature: gene Location: 714408-714588 bp Feature: gene Location: 714769-716676 bp Ori: QCK36989.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715099-715843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 5099-71 5843 bp Feature: gene Location: 716814-717836 bp Feature: domain Description: VirD4 Location: 716958-717729 bp Feature: domain Description: VirD4 Location: 71 6958-71 7729 bp Feature: gene Location: 717890-718022 bp Feature: gene Location: 718003-718314 bp Ori: QCK36990.1 Feature: domain Description: SSB_OBF Location: 718087-718273 bp Feature: domain Description: SSB_OBF Location: 71 8087-71 8273 bp Feature: gene Location: 718318-718449 bp Ori: QCK36991.1 Feature: domain Description: Maff2 Location: 718321-718447 bp Feature: domain Description: Maff2 Location: 71 8321 -71 8447 bp Feature: gene Location: 719173-721032 bp Ori: QCK36992.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 719494-720229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 9494-720229 bp Feature: domain Description: HNHc Note: nucleases Location: 720760-720922 bp Feature: domain Description: HNHc Note: nucleases Location: 720760-720922 bp Feature: gene Location: 721185-721283 bp Feature: domain Description: Maff2 Location: 721188-721278 bp Feature: domain Description: Maff2 Location: 721 1 88-721 278 bp Feature: gene Location: 721303-722166 bp Feature: gene Location: 741397-742056 bp Ori: QCK37002.1 Feature: domain Description: SSB_OBF Location: 741652-741922 bp Feature: domain Description: SSB_OBF Location: 741 652-741 922 bp Feature: gene Location: 742125-743219 bp Ori: QCK37003.1 Feature: domain Description: Relaxase Location: 742227-742638 bp Feature: domain Description: Relaxase Location: 742227-742638 bp Feature: gene Location: 743220-745097 bp Ori: QCK37004.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743544-744366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743544-744366 bp Feature: domain Description: Intron_maturas2 Location: 744465-744747 bp Feature: domain Description: Intron_maturas2 Location: 744465-744747 bp Feature: gene Location: 745598-745933 bp Feature: domain Description: Relaxase Location: 745628-745934 bp Feature: domain Description: Relaxase Location: 745628-745934 bp Feature: gene Location: 745936-746292 bp Ori: QCK37005.1 Gene: mobC Feature: domain Description: MobC Location: 746134-746248 bp Feature: domain Description: MobC Location: 7461 34-746248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, SSB_OBF (cd04496), Maff2 (pfam12750), HNHc (smart00507), Relaxase (pfam03432), Intron_maturas2 (pfam01348), MobC (pfam05713)