myRT

myRT report for GCA_005163865.1_ASM516386v1

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Seq: CP035434.1 Streptococcus pyogenes strain emm75.1 chromosome, complete genome (1887700 bp)
Overview 1 RT 1: 965106-975996 bp 2 RT 2: 989216-994673 bp Neighborhood of RT #1 [965106, 975996] KOG1000 RVT-GII Intron_maturas2 HNHc AdoMet_MTases COG4646 Neighborhood of RT #2 [989216, 994673] TraG-D_C RVT-GII T4SS-DNA_transf Feature: gene Location: 965106-965411 bp Feature: gene Location: 965479-966432 bp Feature: domain Description: KOG1000 Location: 965482-965677 bp Feature: domain Description: KOG1 000 Location: 965482-965677 bp Feature: gene Location: 966537-968348 bp Ori: QCK38909.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966801-967623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966801 -967623 bp Feature: domain Description: Intron_maturas2 Location: 967692-968166 bp Feature: domain Description: Intron_maturas2 Location: 967692-9681 66 bp Feature: domain Description: HNHc Note: nucleases Location: 968166-968331 bp Feature: domain Description: HNHc Note: nucleases Location: 9681 66-968331 bp Feature: gene Location: 968913-975260 bp Ori: QCK38910.1 Feature: domain Description: AdoMet_MTases Location: 971478-971829 bp Feature: domain Description: AdoMet_MTases Location: 971 478-971 829 bp Feature: domain Description: COG4646 Location: 972552-974856 bp Feature: domain Description: COG4646 Location: 972552-974856 bp Feature: gene Location: 975856-975996 bp Feature: gene Location: 989216-989458 bp Feature: gene Location: 989474-990106 bp Ori: QCK39753.1 Feature: domain Description: TraG-D_C Location: 989555-989882 bp Feature: domain Description: TraG-D_C Location: 989555-989882 bp Feature: gene Location: 990129-992039 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990438-991194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990438-991 1 94 bp Feature: gene Location: 992848-994185 bp Feature: domain Description: T4SS-DNA_transf Location: 993271-994186 bp Feature: domain Description: T4SS-DNA_transf Location: 993271 -9941 86 bp Feature: gene Location: 994182-994673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AdoMet_MTases (cl17173), COG4646 (Adenine-specific DNA methylase, N12 class ), TraG-D_C (pfam12696), T4SS-DNA_transf (pfam02534)