myRT

myRT report for GCA_005165545.1_ASM516554v1

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Seq: CP038281.1 Raoultella ornithinolytica strain WLK218 chromosome, complete genome (5623484 bp)
Overview 1 RT 1: 2357657-2362963 bp Neighborhood of RT #1 [2357657, 2363073] SymE_toxin HicB RVT-UG5 RpiR Feature: gene Location: 2357657-2357944 bp Ori: QCK77789.1 Feature: domain Description: SymE_toxin Location: 2357705-2357849 bp Feature: domain Description: SymE_toxin Location: 2357705-2357849 bp Feature: gene Location: 2358081-2358269 bp Ori: QCK77790.1 Feature: domain Description: HicB Location: 2358135-2358216 bp Feature: domain Description: HicB Location: 23581 35-235821 6 bp Feature: gene Location: 2358306-2361308 bp Ori: QCK77791.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2358819-2359323 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 235881 9-2359323 bp Feature: gene Location: 2361295-2361780 bp Feature: gene Location: 2362336-2363073 bp Ori: QCK77793.1 Feature: domain Description: RpiR Location: 2362369-2362963 bp Feature: domain Description: RpiR Location: 2362369-2362963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SymE_toxin (pfam08845), HicB (pfam05534), RVT-UG5, RpiR (COG1737)

Seq: CP038280.1 Raoultella ornithinolytica strain WLK218 plasmid pWLK-NDM, complete sequence (75415 bp)
Overview 1 RT 1: 17349-21734 bp Neighborhood of RT #1 [17349, 21799] PRK13753 Multi_Drug_Res RVT-GII GIIM PRK09449 Nudix_Hydrolase_31 Feature: gene Location: 17349-18188 bp Ori: QCK75733.1 Gene: sul1 Feature: domain Description: PRK13753 Location: 17352-18186 bp Feature: domain Description: PRK13753 Location: 17352 -18186 bp Feature: gene Location: 18182-18529 bp Ori: QCK75734.1 Feature: domain Description: Multi_Drug_Res Location: 18191-18464 bp Feature: domain Description: Multi_Drug_Res Location: 18191-18464 bp Feature: gene Location: 19202-20551 bp Ori: QCK75735.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19484-20102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19484-2 0102 bp Feature: domain Description: GIIM Note: maturase Location: 20150-20354 bp Feature: domain Description: GIIM Note: maturase Location: 2 0150-2 0354 bp Feature: gene Location: 20651-21331 bp Ori: QCK75736.1 Feature: domain Description: PRK09449 Location: 20660-21323 bp Feature: domain Description: PRK09449 Location: 2 0660-2 132 3 bp Feature: gene Location: 21398-21799 bp Ori: QCK75737.1 Feature: domain Description: Nudix_Hydrolase_31 Location: 21416-21734 bp Feature: domain Description: Nudix_Hydrolase_31 Location: 2 1416-2 1734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13753 (dihydropteroate synthase; Provisional), Multi_Drug_Res (pfam00893), RVT-GII, GIIM (pfam08388), PRK09449 (dUMP phosphatase; Provisional), Nudix_Hydrolase_31 (cd04690)

Seq: CP038277.1 Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence (238550 bp)
Overview 1 RT 1: 170197-175429 bp Neighborhood of RT #1 [170197, 175431] PRK13746 RVT-GII GIIM DHFR PRK15417 Feature: gene Location: 170197-170985 bp Ori: QCK75538.1 Feature: domain Description: PRK13746 Location: 170200-170980 bp Feature: domain Description: PRK13 746 Location: 170200-170980 bp Feature: gene Location: 170999-171463 bp Feature: gene Location: 172018-173367 bp Ori: QCK75540.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172300-172918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1723 00-172918 bp Feature: domain Description: GIIM Note: maturase Location: 172966-173170 bp Feature: domain Description: GIIM Note: maturase Location: 172966-173 170 bp Feature: gene Location: 173449-173922 bp Ori: QCK75541.1 Feature: domain Description: DHFR Location: 173458-173914 bp Feature: domain Description: DHFR Location: 173 458-173 914 bp Feature: gene Location: 174418-175431 bp Ori: QCK75542.1 Gene: intI1 Feature: domain Description: PRK15417 Location: 174421-175429 bp Feature: domain Description: PRK15417 Location: 174421-175429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13746 (aminoglycoside resistance protein; Provisional), RVT-GII, GIIM (pfam08388), DHFR (cl17279), PRK15417 (integron integrase)