myRT

myRT report for GCA_005166025.1_ASM516602v1

Download annotations/find similar RTs

Seq: CP028923.1 Fabibacter pacificus strain 9dcg1 chromosome, complete genome (4661901 bp)
Overview 1 RT 1: 2250449-2254731 bp 2 RT 2: 2994930-2999401 bp 3 RT 3: 3552406-3557132 bp Neighborhood of RT #1 [2250449, 2254736] Transposase_20 RVT-GII GIIM Disulph_isomer SUF_assoc Neighborhood of RT #2 [2994930, 2999412] PYR_PYL_RCAR_like TfoX_N RVT-GII TlpA_like_family Tiki Neighborhood of RT #3 [3552406, 3557149] RVT-GII upstrm_HI1419 dnstrm_HI1420 Feature: gene Location: 2250449-2251132 bp Feature: gene Location: 2251250-2251663 bp Ori: QCK15040.1 Feature: domain Description: Transposase_20 Location: 2251307-2251532 bp Feature: domain Description: Transposase_20 Location: 2251 307-2251 532 bp Feature: gene Location: 2252229-2253437 bp Ori: QCK17048.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252397-2253057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252397-2253057 bp Feature: domain Description: GIIM Note: maturase Location: 2253138-2253357 bp Feature: domain Description: GIIM Note: maturase Location: 22531 38-2253357 bp Feature: gene Location: 2253984-2254400 bp Ori: QCK15041.1 Feature: domain Description: Disulph_isomer Location: 2253990-2254398 bp Feature: domain Description: Disulph_isomer Location: 2253990-2254398 bp Feature: gene Location: 2254419-2254736 bp Ori: QCK15042.1 Feature: domain Description: SUF_assoc Location: 2254443-2254731 bp Feature: domain Description: SUF_assoc Location: 2254443-2254731 bp Feature: gene Location: 2994930-2995373 bp Ori: QCK15629.1 Feature: domain Description: PYR_PYL_RCAR_like Location: 2994942-2995326 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 2994942-2995326 bp Feature: gene Location: 2995378-2995719 bp Ori: QCK15630.1 Feature: domain Description: TfoX_N Location: 2995426-2995699 bp Feature: domain Description: TfoX_N Location: 2995426-2995699 bp Feature: gene Location: 2996082-2997360 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2996277-2996457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2996277-2996457 bp Feature: gene Location: 2998011-2998997 bp Ori: QCK15631.1 Feature: domain Description: TlpA_like_family Location: 2998608-2998947 bp Feature: domain Description: TlpA_like_family Location: 2998608-2998947 bp Feature: gene Location: 2999191-2999412 bp Ori: QCK15632.1 Feature: domain Description: Tiki Location: 2999227-2999401 bp Feature: domain Description: Tiki Location: 2999227-2999401 bp Feature: gene Location: 3552406-3552852 bp Feature: gene Location: 3553053-3553982 bp Feature: gene Location: 3554318-3555596 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3554513-3554693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355451 3-3554693 bp Feature: gene Location: 3556559-3556864 bp Ori: QCK16106.1 Feature: domain Description: upstrm_HI1419 Location: 3556568-3556850 bp Feature: domain Description: upstrm_HI1 41 9 Location: 3556568-3556850 bp Feature: gene Location: 3556865-3557149 bp Ori: QCK16107.1 Feature: domain Description: dnstrm_HI1420 Location: 3556871-3557132 bp Feature: domain Description: dnstrm_HI1 420 Location: 3556871 -35571 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), Disulph_isomer (pfam06491), SUF_assoc (TIGR02945), PYR_PYL_RCAR_like (cd07821), TfoX_N (pfam04993), TlpA_like_family (cd02966), Tiki (cd14789), upstrm_HI1419 (TIGR02683)
dnstrm_HI1420 (TIGR02684)