myRT

myRT report for GCA_005221325.1_ASM522132v1

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Seq: CP039888.1 Agrobacterium tumefaciens strain CFBP5499 chromosome circular, complete sequence (2949438 bp)
Overview 1 RT 1: 176599-181035 bp 2 RT 2: 290919-296015 bp Neighborhood of RT #1 [176599, 181046] PRK05643 RVT-DGRs PHA00652 PHA00653 PHA00653 Neighborhood of RT #2 [290919, 296015] RVT-Retrons Trypsin_2 Feature: gene Location: 176599-177972 bp Ori: QCL72150.1 Gene: dnaN Feature: domain Description: PRK05643 Location: 176860-177967 bp Feature: domain Description: PRK05643 Location: 1 76860-1 77967 bp Feature: gene Location: 178081-178374 bp Feature: gene Location: 178358-179692 bp Ori: QCL72152.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 178895-179546 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 78895-1 79546 bp Feature: gene Location: 179689-180066 bp Ori: QCL72153.1 Gene: avd Feature: domain Description: PHA00652 Location: 179722-180061 bp Feature: domain Description: PHA00652 Location: 1 79722-1 80061 bp Feature: gene Location: 180111-181046 bp Ori: QCL72154.1 Feature: domain Description: PHA00653 Location: 180177-180891 bp Feature: domain Description: PHA00653 Location: 1 801 77-1 80891 bp Feature: domain Description: PHA00653 Location: 180909-181035 bp Feature: domain Description: PHA00653 Location: 1 80909-1 81 035 bp Feature: gene Location: 290919-291113 bp Feature: gene Location: 291276-292115 bp Feature: gene Location: 292663-294117 bp Ori: QCL74619.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 292684-293281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 292684-293281 bp Feature: domain Description: Trypsin_2 Location: 293629-294037 bp Feature: domain Description: Trypsin_2 Location: 293629-294037 bp Feature: gene Location: 294607-295323 bp Feature: gene Location: 295320-296015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05643 (DNA polymerase III subunit beta; Validated), RVT-DGRs, PHA00652 (hypothetical protein), PHA00653 (mtd;major tropism determinant), RVT-Retrons, Trypsin_2 (pfam13365)