myRT

myRT report for GCA_005221785.1_ASM522178v1

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Seq: CP028653.1 Escherichia coli strain 123 plasmid pTA123, complete sequence (92739 bp)
Overview 1 RT 1: 55905-59476 bp Neighborhood of RT #1 [55905, 59476] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55905-56201 bp Feature: gene Location: 56228-56442 bp Feature: gene Location: 56464-58188 bp Ori: QCM80179.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56521-56758 bp Feature: domain Description: RVT_N Location: 56521 -56758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56809-57457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56809-57457 bp Feature: domain Description: YkfC Location: 57589-57745 bp Feature: domain Description: YkfC Location: 57589-57745 bp Feature: domain Description: HNHc Note: nucleases Location: 57973-58132 bp Feature: domain Description: HNHc Note: nucleases Location: 57973-581 32 bp Feature: gene Location: 58265-59167 bp Ori: QCM80180.1 Feature: domain Description: DUF1281 Location: 58334-58862 bp Feature: domain Description: DUF1 281 Location: 58334-58862 bp Feature: domain Description: DUF1281_C Location: 58868-59096 bp Feature: domain Description: DUF1 281 _C Location: 58868-59096 bp Feature: gene Location: 59171-59476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)