myRT

myRT report for GCA_005221885.1_ASM522188v1

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Seq: CP028608.1 Escherichia coli strain 143 plasmid pTA143, complete sequence (92745 bp)
Overview 1 RT 1: 79777-83348 bp Neighborhood of RT #1 [79777, 83348] DUF1281 DUF1281_C RVT_N RVT-GII YkfC HNHc Feature: gene Location: 79777-80082 bp Feature: gene Location: 80086-80988 bp Ori: QCL51339.1 Feature: domain Description: DUF1281 Location: 80155-80683 bp Feature: domain Description: DUF1 281 Location: 801 55-80683 bp Feature: domain Description: DUF1281_C Location: 80689-80917 bp Feature: domain Description: DUF1 281 _C Location: 80689-8091 7 bp Feature: gene Location: 81065-82789 bp Ori: QCL51340.1 Gene: ltrA Feature: domain Description: RVT_N Location: 81122-81359 bp Feature: domain Description: RVT_N Location: 81 1 22-81 359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81410-82058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 41 0-82058 bp Feature: domain Description: YkfC Location: 82190-82346 bp Feature: domain Description: YkfC Location: 821 90-82346 bp Feature: domain Description: HNHc Note: nucleases Location: 82574-82733 bp Feature: domain Description: HNHc Note: nucleases Location: 82574-82733 bp Feature: gene Location: 82811-83025 bp Feature: gene Location: 83052-83348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)