myRT

myRT report for GCA_005222285.1_ASM522228v1

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Seq: CP028684.1 Escherichia coli strain 112 plasmid pTA112, complete sequence (92725 bp)
Overview 1 RT 1: 55897-59468 bp Neighborhood of RT #1 [55897, 59468] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55897-56193 bp Feature: gene Location: 56220-56434 bp Feature: gene Location: 56456-58180 bp Ori: QCN40520.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56513-56750 bp Feature: domain Description: RVT_N Location: 5651 3-56750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56801-57449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56801 -57449 bp Feature: domain Description: YkfC Location: 57581-57737 bp Feature: domain Description: YkfC Location: 57581 -57737 bp Feature: domain Description: HNHc Note: nucleases Location: 57965-58124 bp Feature: domain Description: HNHc Note: nucleases Location: 57965-581 24 bp Feature: gene Location: 58257-59159 bp Ori: QCN40521.1 Feature: domain Description: DUF1281 Location: 58326-58854 bp Feature: domain Description: DUF1 281 Location: 58326-58854 bp Feature: domain Description: DUF1281_C Location: 58860-59088 bp Feature: domain Description: DUF1 281 _C Location: 58860-59088 bp Feature: gene Location: 59163-59468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)