myRT

myRT report for GCA_005222305.1_ASM522230v1

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Seq: CP028692.1 Escherichia coli strain 109 plasmid pTA109, complete sequence (92714 bp)
Overview 1 RT 1: 55900-59471 bp Neighborhood of RT #1 [55900, 59471] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55900-56196 bp Feature: gene Location: 56223-56437 bp Feature: gene Location: 56459-58183 bp Ori: QCN57019.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56516-56753 bp Feature: domain Description: RVT_N Location: 5651 6-56753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56804-57452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56804-57452 bp Feature: domain Description: YkfC Location: 57584-57740 bp Feature: domain Description: YkfC Location: 57584-57740 bp Feature: domain Description: HNHc Note: nucleases Location: 57968-58127 bp Feature: domain Description: HNHc Note: nucleases Location: 57968-581 27 bp Feature: gene Location: 58260-59162 bp Ori: QCN57020.1 Feature: domain Description: DUF1281 Location: 58329-58857 bp Feature: domain Description: DUF1 281 Location: 58329-58857 bp Feature: domain Description: DUF1281_C Location: 58863-59091 bp Feature: domain Description: DUF1 281 _C Location: 58863-59091 bp Feature: gene Location: 59166-59471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)