myRT

myRT report for GCA_005222365.1_ASM522236v1

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Seq: CP028701.1 Escherichia coli strain 105 plasmid pTA105, complete sequence (92738 bp)
Overview 1 RT 1: 55903-59474 bp Neighborhood of RT #1 [55903, 59474] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 55903-56199 bp Feature: gene Location: 56226-56440 bp Feature: gene Location: 56462-58186 bp Ori: QCN78909.1 Gene: ltrA Feature: domain Description: RVT_N Location: 56519-56756 bp Feature: domain Description: RVT_N Location: 5651 9-56756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56807-57455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56807-57455 bp Feature: domain Description: YkfC Location: 57587-57743 bp Feature: domain Description: YkfC Location: 57587-57743 bp Feature: domain Description: HNHc Note: nucleases Location: 57971-58130 bp Feature: domain Description: HNHc Note: nucleases Location: 57971 -581 30 bp Feature: gene Location: 58263-59165 bp Ori: QCN78910.1 Feature: domain Description: DUF1281 Location: 58332-58860 bp Feature: domain Description: DUF1 281 Location: 58332-58860 bp Feature: domain Description: DUF1281_C Location: 58866-59094 bp Feature: domain Description: DUF1 281 _C Location: 58866-59094 bp Feature: gene Location: 59169-59474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP028700.1 Escherichia coli strain 105 chromosome, complete genome (5459492 bp)
Overview 1 RT 1: 3077012-3080230 bp Neighborhood of RT #1 [3077012, 3080232] RVT_N RVT-GII YkfC HNHc Phage_tail_U Minor_tail_Z Feature: gene Location: 3077012-3077308 bp Feature: gene Location: 3077335-3077549 bp Feature: gene Location: 3077571-3079295 bp Ori: QCN76413.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3077628-3077865 bp Feature: domain Description: RVT_N Location: 307762 8-3077865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3077916-3078564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3077916-3078564 bp Feature: domain Description: YkfC Location: 3078696-3078852 bp Feature: domain Description: YkfC Location: 3078696-3078852 bp Feature: domain Description: HNHc Note: nucleases Location: 3079080-3079239 bp Feature: domain Description: HNHc Note: nucleases Location: 3079080-30792 39 bp Feature: gene Location: 3079328-3079657 bp Ori: QCN76414.1 Feature: domain Description: Phage_tail_U Location: 3079331-3079619 bp Feature: domain Description: Phage_tail_U Location: 3079331-3079619 bp Feature: gene Location: 3079654-3080232 bp Ori: QCN76415.1 Feature: domain Description: Minor_tail_Z Location: 3079663-3080230 bp Feature: domain Description: Minor_tail_Z Location: 3079663-30802 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), Phage_tail_U (pfam06141), Minor_tail_Z (pfam06763)