myRT

myRT report for GCA_005222465.1_ASM522246v1

Download annotations/find similar RTs

Seq: CP028900.1 Salmonella enterica subsp. enterica serovar California strain CD-SL01 chromosome, complete genome (4833791 bp)
Overview 1 RT 1: 4298142-4304503 bp Neighborhood of RT #1 [4298142, 4304508] YjeJ DUF4156 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 4298142-4298999 bp Ori: QCN82899.1 Feature: domain Description: YjeJ Location: 4298145-4298988 bp Feature: domain Description: YjeJ Location: 42981 45-4298988 bp Feature: gene Location: 4299047-4299400 bp Ori: QCN82900.1 Feature: domain Description: DUF4156 Location: 4299116-4299392 bp Feature: domain Description: DUF41 56 Location: 42991 1 6-4299392 bp Feature: gene Location: 4299734-4301431 bp Ori: QCN82901.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4299797-4300031 bp Feature: domain Description: RVT_N Location: 4299797-4300031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4300085-4300730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4300085-4300730 bp Feature: domain Description: GIIM Note: maturase Location: 4300784-4301015 bp Feature: domain Description: GIIM Note: maturase Location: 4300784-4301 01 5 bp Feature: domain Description: HNHc Note: nucleases Location: 4301225-4301387 bp Feature: domain Description: HNHc Note: nucleases Location: 4301 225-4301 387 bp Feature: gene Location: 4302525-4304171 bp Ori: QCN82902.1 Gene: groL Feature: domain Description: groEL Location: 4302531-4304157 bp Feature: domain Description: groEL Location: 4302531 -43041 57 bp Feature: gene Location: 4304215-4304508 bp Ori: QCN82903.1 Gene: groES Feature: domain Description: groES Location: 4304218-4304503 bp Feature: domain Description: groES Location: 430421 8-4304503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjeJ (pfam15922), DUF4156 (pfam13698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)