myRT

myRT report for GCA_005280735.1_ASM528073v1

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Seq: CP040077.1 Burkholderia sp. DHOD12 chromosome 1, complete sequence (4775917 bp)
Overview 1 RT 1: 887461-894377 bp 2 RT 2: 1649212-1653731 bp 3 RT 3: 3005195-3008482 bp Neighborhood of RT #1 [887461, 895129] xseA PRK10543 RVT-G2L COG3183 COG4637 COG4637 Neighborhood of RT #2 [1649212, 1653731] SET HU RVT_N RVT-GII GIIM HNH Neighborhood of RT #3 [3005195, 3008481] CitM RVT-GII GIIM CitM Feature: gene Location: 887461-888864 bp Ori: QCP48431.1 Feature: domain Description: xseA Location: 887533-888823 bp Feature: domain Description: xseA Location: 887533-888823 bp Feature: gene Location: 889050-889631 bp Ori: QCP48432.1 Feature: domain Description: PRK10543 Location: 889053-889626 bp Feature: domain Description: PRK1 0543 Location: 889053-889626 bp Feature: gene Location: 890709-891905 bp Ori: QCP48433.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 890931-891585 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 890931 -891 585 bp Feature: gene Location: 892415-893170 bp Ori: QCP51635.1 Feature: domain Description: COG3183 Location: 892442-893120 bp Feature: domain Description: COG31 83 Location: 892442-8931 20 bp Feature: gene Location: 893276-895129 bp Ori: QCP48434.1 Feature: domain Description: COG4637 Location: 893297-893432 bp Feature: domain Description: COG4637 Location: 893297-893432 bp Feature: domain Description: COG4637 Location: 893894-894377 bp Feature: domain Description: COG4637 Location: 893894-894377 bp Feature: gene Location: 1649212-1649652 bp Ori: QCP49043.1 Feature: domain Description: SET Location: 1649224-1649635 bp Feature: domain Description: SET Location: 1 649224-1 649635 bp Feature: gene Location: 1650309-1650587 bp Ori: QCP49044.1 Feature: domain Description: HU Location: 1650315-1650567 bp Feature: domain Description: HU Location: 1 65031 5-1 650567 bp Feature: gene Location: 1651180-1652877 bp Ori: QCP49045.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1651234-1651477 bp Feature: domain Description: RVT_N Location: 1 651 234-1 651 477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1651522-1652161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 651 522-1 6521 61 bp Feature: domain Description: GIIM Note: maturase Location: 1652212-1652446 bp Feature: domain Description: GIIM Note: maturase Location: 1 65221 2-1 652446 bp Feature: domain Description: HNH Note: nucleases Location: 1652704-1652830 bp Feature: domain Description: HNH Note: nucleases Location: 1 652704-1 652830 bp Feature: gene Location: 1653194-1653379 bp Feature: gene Location: 1653485-1653731 bp Feature: gene Location: 3005195-3006031 bp Feature: domain Description: CitM Location: 3005198-3006029 bp Feature: domain Description: CitM Location: 30051 98-3006029 bp Feature: gene Location: 3006032-3006259 bp Feature: gene Location: 3006217-3007524 bp Ori: QCP50115.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3006508-3007171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3006508-30071 71 bp Feature: domain Description: GIIM Note: maturase Location: 3007243-3007456 bp Feature: domain Description: GIIM Note: maturase Location: 3007243-3007456 bp Feature: gene Location: 3007551-3007770 bp Feature: gene Location: 3008020-3008481 bp Feature: domain Description: CitM Location: 3008023-3008482 bp Feature: domain Description: CitM Location: 3008023-3008482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xseA (TIGR00237), PRK10543 (superoxide dismutase ), RVT-G2L, COG3183 (Predicted restriction endonuclease, HNH family ), COG4637 (Predicted ATPase ), SET (smart00317), HU (cd13831), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)
HNH (pfam01844), CitM (COG2851)