myRT

myRT report for GCA_005281475.1_ASM528147v1

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Seq: CP040106.1 Echinicola rosea strain JL3085 chromosome, complete genome (6064527 bp)
Overview 1 RT 1: 5176608-5186825 bp 2 RT 2: 5833329-5836746 bp Neighborhood of RT #1 [5176608, 5186825] HTH_ARSR RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII YkfC Resolvase Recombinase Zn_ribbon_recom Neighborhood of RT #2 [5833329, 5836746] IscR Hemerythrin RVT-GII GIIM Feature: gene Location: 5176608-5176985 bp Feature: domain Description: HTH_ARSR Location: 5176728-5176929 bp Feature: domain Description: HTH_ARSR Location: 51 76728-51 76929 bp Feature: gene Location: 5177266-5177517 bp Feature: gene Location: 5177658-5178626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5177667-5178327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 77667-51 78327 bp Feature: domain Description: GIIM Note: maturase Location: 5178414-5178591 bp Feature: domain Description: GIIM Note: maturase Location: 51 7841 4-51 78591 bp Feature: gene Location: 5178671-5178871 bp Feature: gene Location: 5179179-5179403 bp Feature: gene Location: 5180708-5181673 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5180849-5181071 bp Feature: domain Description: LZ_Tnp_IS66 Location: 51 80849-51 81 071 bp Feature: domain Description: zf-IS66 Location: 5181104-5181191 bp Feature: domain Description: zf-IS66 Location: 51 81 1 04-51 81 1 91 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5181257-5181659 bp Feature: domain Description: DDE_Tnp_IS66 Location: 51 81 257-51 81 659 bp Feature: gene Location: 5181882-5182025 bp Feature: gene Location: 5182282-5183988 bp Feature: domain Description: RVT_N Location: 5182330-5182570 bp Feature: domain Description: RVT_N Location: 51 82330-51 82570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5182618-5183290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 8261 8-51 83290 bp Feature: domain Description: YkfC Location: 5183440-5183602 bp Feature: domain Description: YkfC Location: 51 83440-51 83602 bp Feature: gene Location: 5184688-5186310 bp Feature: domain Description: Resolvase Location: 5184706-5185150 bp Feature: domain Description: Resolvase Location: 51 84706-51 851 50 bp Feature: domain Description: Recombinase Location: 5185225-5185477 bp Feature: domain Description: Recombinase Location: 51 85225-51 85477 bp Feature: domain Description: Zn_ribbon_recom Location: 5185531-5185630 bp Feature: domain Description: Zn_ribbon_recom Location: 51 85531 -51 85630 bp Feature: gene Location: 5186643-5186825 bp Feature: gene Location: 5833329-5833766 bp Feature: domain Description: IscR Location: 5833332-5833737 bp Feature: domain Description: IscR Location: 5833332-5833737 bp Feature: gene Location: 5833770-5834255 bp Feature: domain Description: Hemerythrin Location: 5833881-5834136 bp Feature: domain Description: Hemerythrin Location: 5833881 -58341 36 bp Feature: gene Location: 5834621-5835901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5834834-5835497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5834834-5835497 bp Feature: domain Description: GIIM Note: maturase Location: 5835578-5835791 bp Feature: domain Description: GIIM Note: maturase Location: 5835578-5835791 bp Feature: gene Location: 5836226-5836384 bp Feature: gene Location: 5836537-5836746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), YkfC (COG3344), Resolvase (smart00857), Recombinase (pfam07508)
Zn_ribbon_recom (pfam13408), IscR (TIGR02010), Hemerythrin (TIGR00058)