myRT

myRT report for GCA_005304985.1_ASM530498v1

Download annotations/find similar RTs

Seq: CP040121.1 Duncaniella sp. B8 chromosome, complete genome (3384950 bp)
Overview 1 RT 1: 375412-381717 bp 2 RT 2: 756367-760507 bp 3 RT 3: 2749567-2752927 bp 4 RT 4: 2904699-2908734 bp 5 RT 5: 3175652-3182903 bp 6 RT 6: 3368014-3373194 bp Neighborhood of RT #1 [375412, 381717] Avd_like RVT-DGRs Neighborhood of RT #2 [756367, 760507] Phage_Mu_F RVT-DGRs Neighborhood of RT #3 [2749567, 2752950] PRK10759 RVT-DGRs HTH_XRE Gp49 Neighborhood of RT #4 [2904699, 2908734] DDE_Tnp_1_assoc YhhI YhhI RVT-DGRs Neighborhood of RT #5 [3175652, 3182908] WYL RVT-Retrons PRK11071 PRK05580 Neighborhood of RT #6 [3368014, 3373194] RVT-DGRs Avd_like Feature: gene Location: 375412-376614 bp Feature: gene Location: 376742-377164 bp Ori: QCP71387.1 Feature: domain Description: Avd_like Location: 376775-377087 bp Feature: domain Description: Avd_like Location: 376775-377087 bp Feature: gene Location: 377118-378971 bp Ori: QCP71388.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 377529-378246 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 377529-378246 bp Feature: gene Location: 378976-379896 bp Feature: gene Location: 380437-381717 bp Feature: gene Location: 756367-757632 bp Ori: QCP73720.1 Feature: domain Description: Phage_Mu_F Location: 756643-756895 bp Feature: domain Description: Phage_Mu_F Location: 756643-756895 bp Feature: gene Location: 757725-757958 bp Feature: gene Location: 758345-759649 bp Ori: QCP71697.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 758558-759236 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 758558-759236 bp Feature: gene Location: 759651-760130 bp Feature: gene Location: 760235-760507 bp Feature: gene Location: 2749567-2749887 bp Ori: QCP73164.1 Feature: domain Description: PRK10759 Location: 2749588-2749831 bp Feature: domain Description: PRK1 0759 Location: 2749588-2749831 bp Feature: gene Location: 2750032-2750505 bp Feature: gene Location: 2750555-2751994 bp Ori: QCP73166.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2750876-2751584 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2750876-2751 584 bp Feature: gene Location: 2752329-2752631 bp Ori: QCP73167.1 Feature: domain Description: HTH_XRE Location: 2752446-2752611 bp Feature: domain Description: HTH_XRE Location: 2752446-275261 1 bp Feature: gene Location: 2752615-2752950 bp Ori: QCP73168.1 Feature: domain Description: Gp49 Location: 2752666-2752927 bp Feature: domain Description: Gp49 Location: 2752666-2752927 bp Feature: gene Location: 2904699-2905835 bp Ori: QCP73821.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 2904726-2904978 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 2904726-2904978 bp Feature: domain Description: YhhI Location: 2905146-2905329 bp Feature: domain Description: YhhI Location: 29051 46-2905329 bp Feature: domain Description: YhhI Location: 2905524-2905731 bp Feature: domain Description: YhhI Location: 2905524-2905731 bp Feature: gene Location: 2906325-2906810 bp Feature: gene Location: 2906813-2908117 bp Ori: QCP73284.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2907026-2907704 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2907026-2907704 bp Feature: gene Location: 2908262-2908465 bp Feature: gene Location: 2908501-2908734 bp Feature: gene Location: 3175652-3176473 bp Feature: gene Location: 3176473-3177396 bp Ori: QCP73510.1 Feature: domain Description: WYL Location: 3176845-3177376 bp Feature: domain Description: WYL Location: 31 76845-31 77376 bp Feature: gene Location: 3177616-3178797 bp Ori: QCP73511.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3177907-3178483 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 77907-31 78483 bp Feature: gene Location: 3178752-3179732 bp Ori: QCP73512.1 Feature: domain Description: PRK11071 Location: 3178800-3179175 bp Feature: domain Description: PRK1 1 071 Location: 31 78800-31 791 75 bp Feature: gene Location: 3180440-3182908 bp Ori: QCP73513.1 Gene: priA Feature: domain Description: PRK05580 Location: 3180443-3182903 bp Feature: domain Description: PRK05580 Location: 31 80443-31 82903 bp Feature: gene Location: 3368014-3368691 bp Feature: gene Location: 3368688-3369608 bp Feature: gene Location: 3369613-3371469 bp Ori: QCP73658.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3370027-3370744 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3370027-3370744 bp Feature: gene Location: 3371472-3371846 bp Ori: QCP73659.1 Feature: domain Description: Avd_like Location: 3371505-3371817 bp Feature: domain Description: Avd_like Location: 3371 505-3371 81 7 bp Feature: gene Location: 3371974-3373194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_Mu_F (pfam04233), PRK10759 (YfiM family lipoprotein), HTH_XRE (smart00530), Gp49 (pfam05973), DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433), WYL (pfam13280), RVT-Retrons
PRK11071 (esterase YqiA; Provisional), PRK05580 (primosome assembly protein PriA; Validated)