myRT

myRT report for GCA_005347525.1_ASM534752v1

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Seq: CP037927.1 Klebsiella pneumoniae strain CRKP I chromosome, complete genome (5318075 bp)
Overview 1 RT 1: 1762523-1766006 bp 2 RT 2: 2100082-2104190 bp 3 RT 3: 2306545-2309053 bp 4 RT 4: 3474956-3482791 bp 5 RT 5: 3507700-3512581 bp 6 RT 6: 4038857-4043564 bp Neighborhood of RT #1 [1762523, 1766011] int RVT-GII DinI Neighborhood of RT #2 [2100082, 2104192] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2306545, 2309053] RVT-GII Neighborhood of RT #4 [3474956, 3482861] AAA_15 RVT-Retrons a_cpa1 TetR_N TetR_C_13 Neighborhood of RT #5 [3507700, 3512586] YccC PRK10016 RVT-GII dacD Neighborhood of RT #6 [4038857, 4043564] DUF3850 Phage_GPA RVT-GII Feature: gene Location: 1762523-1763575 bp Ori: QCQ07201.1 Feature: domain Description: int Location: 1762526-1763525 bp Feature: domain Description: int Location: 1 762526-1 763525 bp Feature: gene Location: 1763743-1763994 bp Feature: gene Location: 1763994-1765478 bp Ori: QCQ07203.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1764396-1765086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 764396-1 765086 bp Feature: gene Location: 1765579-1765767 bp Feature: gene Location: 1765706-1766011 bp Ori: QCQ07204.1 Feature: domain Description: DinI Location: 1765820-1766006 bp Feature: domain Description: DinI Location: 1 765820-1 766006 bp Feature: gene Location: 2100082-2100324 bp Ori: QCQ07498.1 Feature: domain Description: DinI Location: 2100133-2100313 bp Feature: domain Description: DinI Location: 21 001 33-21 0031 3 bp Feature: gene Location: 2100691-2100942 bp Feature: gene Location: 2100942-2102426 bp Ori: QCQ07500.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2101344-2102034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 01 344-21 02034 bp Feature: gene Location: 2102505-2102924 bp Ori: QCQ07501.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2102508-2102919 bp Feature: domain Description: PRK1 0276 Location: 21 02508-21 0291 9 bp Feature: gene Location: 2102927-2104192 bp Ori: QCQ07502.1 Gene: umuC Feature: domain Description: umuC Location: 2102930-2104190 bp Feature: domain Description: umuC Location: 21 02930-21 041 90 bp Feature: gene Location: 2306545-2306754 bp Feature: gene Location: 2306956-2307207 bp Feature: gene Location: 2307207-2308691 bp Ori: QCQ07707.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2307609-2308299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2307609-2308299 bp Feature: gene Location: 2308684-2308755 bp Feature: gene Location: 2308769-2309053 bp Feature: gene Location: 3474956-3475186 bp Feature: gene Location: 3476099-3478345 bp Ori: QCQ08726.1 Feature: domain Description: AAA_15 Location: 3476102-3477110 bp Feature: domain Description: AAA_1 5 Location: 34761 02-34771 1 0 bp Feature: gene Location: 3478460-3479560 bp Ori: QCQ08727.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3478643-3479171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3478643-34791 71 bp Feature: gene Location: 3479932-3481566 bp Ori: QCQ08728.1 Feature: domain Description: a_cpa1 Location: 3479959-3481561 bp Feature: domain Description: a_cpa1 Location: 3479959-3481 561 bp Feature: gene Location: 3482158-3482861 bp Feature: domain Description: TetR_N Location: 3482251-3482374 bp Feature: domain Description: TetR_N Location: 3482251 -3482374 bp Feature: domain Description: TetR_C_13 Location: 3482452-3482791 bp Feature: domain Description: TetR_C_1 3 Location: 3482452-3482791 bp Feature: gene Location: 3507700-3508758 bp Ori: QCQ08754.1 Feature: domain Description: YccC Location: 3507706-3508744 bp Feature: domain Description: YccC Location: 3507706-3508744 bp Feature: gene Location: 3508857-3509330 bp Ori: QCQ08755.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 3508860-3509319 bp Feature: domain Description: PRK1 001 6 Location: 3508860-350931 9 bp Feature: gene Location: 3509412-3510896 bp Ori: QCQ08756.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3509814-3510504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350981 4-351 0504 bp Feature: gene Location: 3510896-3511147 bp Feature: gene Location: 3511417-3512586 bp Ori: QCQ08758.1 Gene: dacD Feature: domain Description: dacD Location: 3511426-3512581 bp Feature: domain Description: dacD Location: 351 1 426-351 2581 bp Feature: gene Location: 4038857-4039138 bp Ori: QCQ09193.1 Feature: domain Description: DUF3850 Location: 4038869-4039106 bp Feature: domain Description: DUF3850 Location: 4038869-40391 06 bp Feature: gene Location: 4039129-4041345 bp Ori: QCQ09194.1 Feature: domain Description: Phage_GPA Location: 4039552-4040494 bp Feature: domain Description: Phage_GPA Location: 4039552-4040494 bp Feature: gene Location: 4041491-4042975 bp Ori: QCQ09195.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4041893-4042583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4041 893-4042583 bp Feature: gene Location: 4042975-4043226 bp Feature: gene Location: 4043382-4043564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), AAA_15 (pfam13175), RVT-Retrons, a_cpa1 (TIGR00831), TetR_N (pfam00440), TetR_C_13 (pfam16925)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), DUF3850 (pfam12961), Phage_GPA (pfam05840)