myRT

myRT report for GCA_005484945.1_ASM548494v1

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Seq: CP034035.1 Brenneria rubrifaciens strain 6D370 chromosome, complete genome (4028093 bp)
Overview 1 RT 1: 1299350-1306419 bp 2 RT 2: 1322217-1326447 bp Neighborhood of RT #1 [1299350, 1306553] DUF4365 TPR TPR Phage_int_SAM_2 Integrase_1 RVT-GII GIIM pheS TadA Neighborhood of RT #2 [1322217, 1326503] Mrr_cat HTH_Tnp_1 RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 rve_3 Feature: gene Location: 1299350-1301386 bp Ori: QCR08122.1 Feature: domain Description: DUF4365 Location: 1299398-1299791 bp Feature: domain Description: DUF4365 Location: 1 299398-1 299791 bp Feature: domain Description: TPR Location: 1300208-1300424 bp Feature: domain Description: TPR Location: 1 300208-1 300424 bp Feature: domain Description: TPR Location: 1300691-1300832 bp Feature: domain Description: TPR Location: 1 300691 -1 300832 bp Feature: gene Location: 1301462-1302326 bp Feature: domain Description: Phage_int_SAM_2 Location: 1301465-1301729 bp Feature: domain Description: Phage_int_SAM_2 Location: 1 301 465-1 301 729 bp Feature: domain Description: Integrase_1 Location: 1301762-1301960 bp Feature: domain Description: Integrase_1 Location: 1 301 762-1 301 960 bp Feature: gene Location: 1302962-1304206 bp Ori: QCR08123.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1303163-1303820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3031 63-1 303820 bp Feature: domain Description: GIIM Note: maturase Location: 1303901-1304126 bp Feature: domain Description: GIIM Note: maturase Location: 1 303901 -1 3041 26 bp Feature: gene Location: 1304693-1305676 bp Ori: QCR08124.1 Feature: domain Description: pheS Location: 1304702-1305671 bp Feature: domain Description: pheS Location: 1 304702-1 305671 bp Feature: gene Location: 1306059-1306553 bp Ori: QCR08125.1 Feature: domain Description: TadA Location: 1306122-1306419 bp Feature: domain Description: TadA Location: 1 3061 22-1 30641 9 bp Feature: gene Location: 1322217-1323089 bp Ori: QCR08138.1 Feature: domain Description: Mrr_cat Location: 1322238-1322523 bp Feature: domain Description: Mrr_cat Location: 1 322238-1 322523 bp Feature: gene Location: 1323241-1323692 bp Feature: domain Description: HTH_Tnp_1 Location: 1323247-1323454 bp Feature: domain Description: HTH_Tnp_1 Location: 1 323247-1 323454 bp Feature: gene Location: 1324206-1325504 bp Ori: QCR08139.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1324461-1325118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 324461 -1 3251 1 8 bp Feature: domain Description: GIIM Note: maturase Location: 1325199-1325424 bp Feature: domain Description: GIIM Note: maturase Location: 1 3251 99-1 325424 bp Feature: gene Location: 1325600-1326103 bp Ori: QCR08140.1 Feature: domain Description: HTH_Tnp_1 Location: 1325630-1325780 bp Feature: domain Description: HTH_Tnp_1 Location: 1 325630-1 325780 bp Feature: domain Description: HTH_Tnp_1 Location: 1325798-1326008 bp Feature: domain Description: HTH_Tnp_1 Location: 1 325798-1 326008 bp Feature: gene Location: 1326132-1326503 bp Feature: domain Description: rve_3 Location: 1326249-1326447 bp Feature: domain Description: rve_3 Location: 1 326249-1 326447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4365 (pfam14280), TPR (smart00028), Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-GII, GIIM (pfam08388), pheS (TIGR00468), TadA (COG0590), Mrr_cat (pfam04471), HTH_Tnp_1 (pfam01527)
rve_3 (pfam13683)