myRT

myRT report for GCA_005518055.1_ASM551805v1

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Seq: CP040255.1 Mycobacterium avium subsp. hominissuis strain 101115 chromosome, complete genome (5254673 bp)
Overview 1 RT 1: 3387108-3393992 bp 2 RT 2: 3479455-3484527 bp Neighborhood of RT #1 [3387108, 3393992] CzcO RVT_N RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 Neighborhood of RT #2 [3479455, 3484529] XerC HTH_38 Tra8 RVT-GII GIIM Tra8 PRK07799 Feature: gene Location: 3387108-3388132 bp Feature: domain Description: CzcO Location: 3387114-3387300 bp Feature: domain Description: CzcO Location: 33871 1 4-3387300 bp Feature: gene Location: 3388164-3389476 bp Feature: gene Location: 3389661-3391448 bp Ori: QCR84299.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3389691-3389928 bp Feature: domain Description: RVT_N Location: 3389691 -3389928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3389988-3390648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3389988-3390648 bp Feature: domain Description: GIIM Note: maturase Location: 3390717-3390948 bp Feature: domain Description: GIIM Note: maturase Location: 339071 7-3390948 bp Feature: gene Location: 3392161-3393399 bp Ori: QCR82647.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 3392173-3392644 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 33921 73-3392644 bp Feature: domain Description: Transposase_20 Location: 3392986-3393238 bp Feature: domain Description: Transposase_20 Location: 3392986-3393238 bp Feature: gene Location: 3393813-3393992 bp Feature: gene Location: 3479455-3480582 bp Ori: QCR82689.1 Feature: domain Description: XerC Location: 3479956-3480337 bp Feature: domain Description: XerC Location: 3479956-3480337 bp Feature: gene Location: 3480834-3481634 bp Feature: domain Description: HTH_38 Location: 3480897-3480972 bp Feature: domain Description: HTH_38 Location: 3480897-3480972 bp Feature: domain Description: Tra8 Location: 3481071-3481635 bp Feature: domain Description: Tra8 Location: 3481 071 -3481 635 bp Feature: gene Location: 3482190-3483701 bp Ori: QCR82690.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3482571-3483255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3482571 -3483255 bp Feature: domain Description: GIIM Note: maturase Location: 3483330-3483546 bp Feature: domain Description: GIIM Note: maturase Location: 3483330-3483546 bp Feature: gene Location: 3483817-3484275 bp Feature: domain Description: Tra8 Location: 3483829-3484246 bp Feature: domain Description: Tra8 Location: 3483829-3484246 bp Feature: gene Location: 3484392-3484529 bp Feature: domain Description: PRK07799 Location: 3484398-3484527 bp Feature: domain Description: PRK07799 Location: 3484398-3484527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CzcO (COG2072), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), XerC (COG4973), HTH_38 (pfam13936), Tra8 (COG2826), PRK07799 (crotonase/enoyl-CoA hydratase family protein)