myRT

myRT report for GCA_005952885.1_ASM595288v1

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Seq: CP040706.1 Enterococcus faecium strain HOU503 chromosome, complete genome (2702943 bp)
Overview 1 RT 1: 4772-14247 bp 2 RT 2: 143476-148373 bp 3 RT 3: 327702-333081 bp 4 RT 4: 1543973-1563200 bp 5 RT 5: 1620970-1625571 bp 6 RT 6: 1968530-1981323 bp Neighborhood of RT #1 [4772, 14255] P-type_ATPase_Ca_prok P-type_ATPase_SERCA UbiE RVT-GII GIIM HMG-CoA-S_prok thiolase HMG-CoA_reductase_classII Neighborhood of RT #2 [143476, 148373] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM Neighborhood of RT #3 [327702, 333083] doc_partner Doc RVT-GII GIIM ldh AraC_binding YesN Neighborhood of RT #4 [1543973, 1563200] FtsK RVT-GII HNHc Zeta_toxin HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Neighborhood of RT #5 [1620970, 1625579] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 HTH_XRE Neighborhood of RT #6 [1968530, 1981323] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 4772-7438 bp Ori: QCW95950.1 Feature: domain Description: P-type_ATPase_Ca_prok Location: 4859-7016 bp Feature: domain Description: P-type_ATPase_Ca_prok Location: 4859-701 6 bp Feature: domain Description: P-type_ATPase_SERCA Location: 7139-7412 bp Feature: domain Description: P-type_ATPase_SERCA Location: 71 39-741 2 bp Feature: gene Location: 7802-8554 bp Ori: QCW95951.1 Feature: domain Description: UbiE Location: 7904-8129 bp Feature: domain Description: UbiE Location: 7904-81 29 bp Feature: gene Location: 9007-10395 bp Ori: QCW95952.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9328-9943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9328-9943 bp Feature: domain Description: GIIM Note: maturase Location: 10000-10216 bp Feature: domain Description: GIIM Note: maturase Location: 1 0000-1 021 6 bp Feature: gene Location: 10475-11629 bp Ori: QCW95953.1 Feature: domain Description: HMG-CoA-S_prok Location: 10484-11621 bp Feature: domain Description: HMG-CoA-S_prok Location: 1 0484-1 1 621 bp Feature: gene Location: 11814-14255 bp Ori: QCW95954.1 Feature: domain Description: thiolase Location: 11829-12969 bp Feature: domain Description: thiolase Location: 1 1 829-1 2969 bp Feature: domain Description: HMG-CoA_reductase_classII Location: 13008-14247 bp Feature: domain Description: HMG-CoA_reductase_classII Location: 1 3008-1 4247 bp Feature: gene Location: 143476-144609 bp Ori: QCW96076.1 Gene: purK Feature: domain Description: PRK06019 Location: 143509-144598 bp Feature: domain Description: PRK0601 9 Location: 1 43509-1 44598 bp Feature: gene Location: 144622-145917 bp Ori: QCW96077.1 Gene: purB Feature: domain Description: Adenylsuccinate_lyase_1 Location: 144634-145903 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 44634-1 45903 bp Feature: gene Location: 146039-147427 bp Ori: QCW96078.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146360-146975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46360-1 46975 bp Feature: domain Description: GIIM Note: maturase Location: 147032-147248 bp Feature: domain Description: GIIM Note: maturase Location: 1 47032-1 47248 bp Feature: gene Location: 147795-147983 bp Feature: gene Location: 147996-148373 bp Feature: gene Location: 327702-327938 bp Ori: QCW96243.1 Feature: domain Description: doc_partner Location: 327723-327933 bp Feature: domain Description: doc_partner Location: 327723-327933 bp Feature: gene Location: 327935-328333 bp Ori: QCW96244.1 Feature: domain Description: Doc Location: 327944-328304 bp Feature: domain Description: Doc Location: 327944-328304 bp Feature: gene Location: 329412-330800 bp Ori: QCW96245.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329733-330348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329733-330348 bp Feature: domain Description: GIIM Note: maturase Location: 330405-330621 bp Feature: domain Description: GIIM Note: maturase Location: 330405-330621 bp Feature: gene Location: 330899-331843 bp Ori: QCW96246.1 Feature: domain Description: ldh Location: 330902-331838 bp Feature: domain Description: ldh Location: 330902-331 838 bp Feature: gene Location: 332139-333083 bp Ori: QCW96247.1 Feature: domain Description: AraC_binding Location: 332280-332463 bp Feature: domain Description: AraC_binding Location: 332280-332463 bp Feature: domain Description: YesN Location: 332565-333081 bp Feature: domain Description: YesN Location: 332565-333081 bp Feature: gene Location: 1543973-1545118 bp Ori: QCW97340.1 Feature: domain Description: FtsK Location: 1544633-1545098 bp Feature: domain Description: FtsK Location: 1 544633-1 545098 bp Feature: gene Location: 1545484-1545714 bp Feature: gene Location: 1545833-1547692 bp Ori: QCW97342.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546142-1546883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5461 42-1 546883 bp Feature: domain Description: HNHc Note: nucleases Location: 1547438-1547576 bp Feature: domain Description: HNHc Note: nucleases Location: 1 547438-1 547576 bp Feature: gene Location: 1547786-1548025 bp Feature: gene Location: 1548103-1548777 bp Ori: QCW97344.1 Feature: domain Description: Zeta_toxin Location: 1548202-1548685 bp Feature: domain Description: Zeta_toxin Location: 1 548202-1 548685 bp Feature: gene Location: 1550691-1551875 bp Ori: QCW97348.1 Feature: domain Description: HTH_XRE Location: 1550721-1550865 bp Feature: domain Description: HTH_XRE Location: 1 550721 -1 550865 bp Feature: domain Description: Rol_Rep_N Location: 1550898-1551162 bp Feature: domain Description: Rol_Rep_N Location: 1 550898-1 551 1 62 bp Feature: domain Description: Rep_trans Location: 1551186-1551798 bp Feature: domain Description: Rep_trans Location: 1 551 1 86-1 551 798 bp Feature: gene Location: 1551872-1552009 bp Ori: QCW97349.1 Feature: domain Description: DUF3789 Location: 1551899-1551992 bp Feature: domain Description: DUF3789 Location: 1 551 899-1 551 992 bp Feature: gene Location: 1552755-1554665 bp Ori: QCW97350.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1553088-1553826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 553088-1 553826 bp Feature: domain Description: HNHc Note: nucleases Location: 1554381-1554546 bp Feature: domain Description: HNHc Note: nucleases Location: 1 554381 -1 554546 bp Feature: gene Location: 1554769-1554993 bp Feature: gene Location: 1555006-1555509 bp Ori: QCW97351.1 Feature: domain Description: ArdA Location: 1555024-1555495 bp Feature: domain Description: ArdA Location: 1 555024-1 555495 bp Feature: gene Location: 1555569-1555958 bp Ori: QCW97352.1 Feature: domain Description: TcpE Location: 1555587-1555887 bp Feature: domain Description: TcpE Location: 1 555587-1 555887 bp Feature: gene Location: 1555945-1557447 bp Feature: domain Description: AAA_10 Location: 1557274-1557445 bp Feature: domain Description: AAA_1 0 Location: 1 557274-1 557445 bp Feature: gene Location: 1558192-1560018 bp Ori: QCW97353.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558492-1559191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 558492-1 5591 91 bp Feature: gene Location: 1560053-1561072 bp Feature: domain Description: AAA_10 Location: 1560137-1561037 bp Feature: domain Description: AAA_1 0 Location: 1 5601 37-1 561 037 bp Feature: gene Location: 1561077-1563200 bp Feature: gene Location: 1620970-1622229 bp Ori: QCW97408.1 Feature: domain Description: PRK09290 Location: 1620976-1622221 bp Feature: domain Description: PRK09290 Location: 1 620976-1 622221 bp Feature: gene Location: 1622345-1622659 bp Ori: QCW97409.1 Feature: domain Description: AlbA_2 Location: 1622384-1622555 bp Feature: domain Description: AlbA_2 Location: 1 622384-1 622555 bp Feature: gene Location: 1622805-1624301 bp Ori: QCW97410.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1623213-1623669 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 62321 3-1 623669 bp Feature: gene Location: 1624479-1624958 bp Ori: QCW97411.1 Feature: domain Description: DUF3841 Location: 1624488-1624863 bp Feature: domain Description: DUF3841 Location: 1 624488-1 624863 bp Feature: gene Location: 1625334-1625579 bp Ori: QCW97412.1 Feature: domain Description: HTH_XRE Location: 1625385-1625571 bp Feature: domain Description: HTH_XRE Location: 1 625385-1 625571 bp Feature: gene Location: 1968530-1968683 bp Feature: gene Location: 1968706-1969911 bp Ori: QCW97732.1 Feature: domain Description: HTH_XRE Location: 1968751-1968895 bp Feature: domain Description: HTH_XRE Location: 1 968751 -1 968895 bp Feature: domain Description: Rol_Rep_N Location: 1968922-1969189 bp Feature: domain Description: Rol_Rep_N Location: 1 968922-1 9691 89 bp Feature: domain Description: Rep_trans Location: 1969213-1969822 bp Feature: domain Description: Rep_trans Location: 1 96921 3-1 969822 bp Feature: gene Location: 1970695-1972605 bp Ori: QCW97733.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1971028-1971766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 971 028-1 971 766 bp Feature: domain Description: HNHc Note: nucleases Location: 1972321-1972486 bp Feature: domain Description: HNHc Note: nucleases Location: 1 972321 -1 972486 bp Feature: gene Location: 1972709-1972933 bp Feature: gene Location: 1973050-1973547 bp Ori: QCW97735.1 Feature: domain Description: ArdA Location: 1973068-1973533 bp Feature: domain Description: ArdA Location: 1 973068-1 973533 bp Feature: gene Location: 1973634-1974026 bp Ori: QCW97736.1 Feature: domain Description: TcpE Location: 1973652-1973952 bp Feature: domain Description: TcpE Location: 1 973652-1 973952 bp Feature: gene Location: 1974010-1975515 bp Feature: domain Description: AAA_10 Location: 1975342-1975513 bp Feature: domain Description: AAA_1 0 Location: 1 975342-1 97551 3 bp Feature: gene Location: 1976260-1978086 bp Ori: QCW97737.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1976560-1977259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 976560-1 977259 bp Feature: gene Location: 1978121-1979137 bp Feature: domain Description: AAA_10 Location: 1978202-1979105 bp Feature: domain Description: AAA_1 0 Location: 1 978202-1 9791 05 bp Feature: gene Location: 1979140-1981323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P-type_ATPase_Ca_prok (cd02089), P-type_ATPase_SERCA (cd02083), UbiE (COG2226), RVT-GII, GIIM (pfam08388), HMG-CoA-S_prok (TIGR01835), thiolase (PRK06158), HMG-CoA_reductase_classII (cd00644), PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360)
doc_partner (TIGR02609), Doc (COG3654), ldh (PRK00066), AraC_binding (pfam02311), YesN (COG4753), FtsK (COG1674), HNHc (smart00507), Zeta_toxin (pfam06414), HTH_XRE (smart00530), Rol_Rep_N (pfam18106)
Rep_trans (pfam02486), DUF3789 (pfam12664), ArdA (pfam07275), TcpE (pfam12648), AAA_10 (pfam12846), PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)

Seq: CP040708.1 Enterococcus faecium strain HOU503 plasmid p2 (71214 bp)
Overview 1 RT 1: 8778-14886 bp 2 RT 2: 59505-63599 bp Neighborhood of RT #1 [8778, 14915] PinE Tra8 RVT-AbiP2 HsdM Rve Neighborhood of RT #2 [59505, 63599] PinE Tra8 RVT-AbiP2 Rve Feature: gene Location: 8778-9341 bp Ori: QCW98504.1 Feature: domain Description: PinE Location: 8790-9336 bp Feature: domain Description: PinE Location: 8790-9336 bp Feature: gene Location: 9984-10937 bp Ori: QCW98505.1 Feature: domain Description: Tra8 Location: 9987-10914 bp Feature: domain Description: Tra8 Location: 9987-10914 bp Feature: gene Location: 10915-12390 bp Ori: QCW98506.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 11263-11728 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 112 63-1172 8 bp Feature: gene Location: 12728-14173 bp Feature: domain Description: HsdM Location: 12749-14174 bp Feature: domain Description: HsdM Location: 12 749-14174 bp Feature: gene Location: 14229-14915 bp Ori: QCW98507.1 Feature: domain Description: Rve Location: 14238-14886 bp Feature: domain Description: Rve Location: 142 38-14886 bp Feature: gene Location: 59505-60068 bp Ori: QCW98557.1 Feature: domain Description: PinE Location: 59517-60063 bp Feature: domain Description: PinE Location: 59517-60063 bp Feature: gene Location: 60711-61664 bp Ori: QCW98558.1 Feature: domain Description: Tra8 Location: 60714-61641 bp Feature: domain Description: Tra8 Location: 60714-61641 bp Feature: gene Location: 61642-62232 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 61990-62230 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 61990-62 2 30 bp Feature: gene Location: 62277-62963 bp Ori: QCW98559.1 Feature: domain Description: Rve Location: 62286-62934 bp Feature: domain Description: Rve Location: 62 2 86-62 934 bp Feature: gene Location: 63033-63599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)