myRT

myRT report for GCA_006088755.1_ASM608875v1

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Seq: CP039339.1 Ralstonia solanacearum strain UW386 chromosome, complete genome (3658282 bp)
Overview 1 RT 1: 1515324-1519093 bp 2 RT 2: 2492143-2497682 bp Neighborhood of RT #1 [1515324, 1519505] HTH_3 RVT-GII GIIM HTH_29 rve COG3415 Neighborhood of RT #2 [2492143, 2497684] PRK10799 degP_htrA_DO RVT-GII GIIM OmpC Feature: gene Location: 1515324-1515614 bp Ori: QCX48955.1 Feature: domain Description: HTH_3 Location: 1515357-1515489 bp Feature: domain Description: HTH_3 Location: 1 51 5357-1 51 5489 bp Feature: gene Location: 1515708-1516036 bp Feature: gene Location: 1516108-1517457 bp Ori: QCX50822.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1516441-1517056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 6441 -1 51 7056 bp Feature: domain Description: GIIM Note: maturase Location: 1517116-1517317 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 71 1 6-1 51 731 7 bp Feature: gene Location: 1517558-1518592 bp Ori: QCX48956.1 Feature: domain Description: HTH_29 Location: 1517600-1517777 bp Feature: domain Description: HTH_29 Location: 1 51 7600-1 51 7777 bp Feature: domain Description: rve Location: 1518044-1518407 bp Feature: domain Description: rve Location: 1 51 8044-1 51 8407 bp Feature: gene Location: 1518652-1519505 bp Feature: domain Description: COG3415 Location: 1518661-1519093 bp Feature: domain Description: COG341 5 Location: 1 51 8661 -1 51 9093 bp Feature: gene Location: 2492143-2492889 bp Ori: QCX49707.1 Feature: domain Description: PRK10799 Location: 2492146-2492887 bp Feature: domain Description: PRK1 0799 Location: 24921 46-2492887 bp Feature: gene Location: 2492909-2494120 bp Ori: QCX49708.1 Feature: domain Description: degP_htrA_DO Location: 2493095-2494061 bp Feature: domain Description: degP_htrA_DO Location: 2493095-2494061 bp Feature: gene Location: 2494798-2496069 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2495131-2495746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24951 31 -2495746 bp Feature: domain Description: GIIM Note: maturase Location: 2495806-2496007 bp Feature: domain Description: GIIM Note: maturase Location: 2495806-2496007 bp Feature: gene Location: 2496141-2496469 bp Feature: gene Location: 2496545-2497684 bp Ori: QCX49709.1 Feature: domain Description: OmpC Location: 2496554-2497682 bp Feature: domain Description: OmpC Location: 2496554-2497682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-GII, GIIM (pfam08388), HTH_29 (pfam13551), rve (pfam00665), COG3415 (Transposase ), PRK10799 (type 2 GTP cyclohydrolase I), degP_htrA_DO (TIGR02037), OmpC (COG3203)