myRT

myRT report for GCA_006094495.1_ASM609449v1

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Seq: CP035095.1 Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence (301273 bp)
Overview 1 RT 1: 40714-46588 bp 2 RT 2: 106964-111857 bp Neighborhood of RT #1 [40714, 46588] TraG-D_C RVT-GII Intron_maturas2 HNHc TraG_VirD4 TraG_VirD4 Neighborhood of RT #2 [106964, 111868] DUF2812 PadR RVT_N RVT-GII GIIM HU Feature: gene Location: 40714-40920 bp Feature: gene Location: 40946-41854 bp Ori: QCY28352.1 Feature: domain Description: TraG-D_C Location: 40955-41267 bp Feature: domain Description: TraG-D_C Location: 40955-41 267 bp Feature: gene Location: 41962-43785 bp Ori: QCY28353.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42235-43063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42235-43063 bp Feature: domain Description: Intron_maturas2 Location: 43141-43435 bp Feature: domain Description: Intron_maturas2 Location: 431 41 -43435 bp Feature: domain Description: HNHc Note: nucleases Location: 43582-43756 bp Feature: domain Description: HNHc Note: nucleases Location: 43582-43756 bp Feature: gene Location: 44326-46092 bp Ori: QCY28354.1 Feature: domain Description: TraG_VirD4 Location: 44881-45559 bp Feature: domain Description: TraG_VirD4 Location: 44881 -45559 bp Feature: domain Description: TraG_VirD4 Location: 45871-46033 bp Feature: domain Description: TraG_VirD4 Location: 45871 -46033 bp Feature: gene Location: 46082-46588 bp Feature: gene Location: 106964-107503 bp Ori: QCY28410.1 Feature: domain Description: DUF2812 Location: 107015-107306 bp Feature: domain Description: DUF281 2 Location: 1 0701 5-1 07306 bp Feature: gene Location: 107505-107840 bp Ori: QCY28411.1 Feature: domain Description: PadR Location: 107556-107814 bp Feature: domain Description: PadR Location: 1 07556-1 0781 4 bp Feature: gene Location: 108599-110248 bp Ori: QCY28412.1 Gene: ltrA Feature: domain Description: RVT_N Location: 108647-108893 bp Feature: domain Description: RVT_N Location: 1 08647-1 08893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108947-109607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08947-1 09607 bp Feature: domain Description: GIIM Note: maturase Location: 109676-109907 bp Feature: domain Description: GIIM Note: maturase Location: 1 09676-1 09907 bp Feature: gene Location: 110956-111174 bp Feature: gene Location: 111596-111868 bp Ori: QCY28414.1 Feature: domain Description: HU Location: 111602-111857 bp Feature: domain Description: HU Location: 1 1 1 602-1 1 1 857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG_VirD4, DUF2812 (pfam11193), PadR (pfam03551), RVT_N (pfam13655), GIIM (pfam08388), HU (cd13831)

Seq: CP035094.1 Bacillus megaterium NBRC 15308 = ATCC 14581 chromosome, complete genome (5343009 bp)
Overview 1 RT 1: 1638067-1646320 bp Neighborhood of RT #1 [1638067, 1646556] GAT1_cyanophycinase GAT1_cyanophycinase RocR RVT-GII Intron_maturas2 HNHc RocR GAT1_cyanophycinase Feature: gene Location: 1638067-1640619 bp Ori: QCY24563.1 Feature: domain Description: GAT1_cyanophycinase Location: 1638178-1638955 bp Feature: domain Description: GAT1_cyanophycinase Location: 1638178-1638955 bp Feature: domain Description: GAT1_cyanophycinase Location: 1639459-1640209 bp Feature: domain Description: GAT1_cyanophycinase Location: 1639459-16402 09 bp Feature: gene Location: 1640832-1642145 bp Feature: domain Description: RocR Location: 1641423-1642146 bp Feature: domain Description: RocR Location: 164142 3-1642 146 bp Feature: gene Location: 1642746-1644569 bp Ori: QCY24564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1643019-1643847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1643019-1643847 bp Feature: domain Description: Intron_maturas2 Location: 1643925-1644219 bp Feature: domain Description: Intron_maturas2 Location: 164392 5-16442 19 bp Feature: domain Description: HNHc Note: nucleases Location: 1644366-1644540 bp Feature: domain Description: HNHc Note: nucleases Location: 1644366-1644540 bp Feature: gene Location: 1644674-1645405 bp Feature: domain Description: RocR Location: 1644677-1645220 bp Feature: domain Description: RocR Location: 1644677-16452 2 0 bp Feature: gene Location: 1645480-1646556 bp Ori: QCY24565.1 Feature: domain Description: GAT1_cyanophycinase Location: 1645651-1646320 bp Feature: domain Description: GAT1_cyanophycinase Location: 1645651-164632 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAT1_cyanophycinase (cd03145), RocR (COG3829), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)