myRT

myRT report for GCA_006228445.1_ASM622844v1

Download annotations/find similar RTs

Seq: CP030163.1 Xanthomonas citri pv. punicae strain NCPPB 3563 chromosome, complete genome (5135943 bp)
Overview 1 RT 1: 1235669-1242274 bp Neighborhood of RT #1 [1235669, 1242408] cydB cyd_oper_ybgT RVT_N RVT-GII GIIM HNHc DUF772 DDE_Tnp_1 RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 1235669-1236831 bp Gene: cydB Feature: domain Description: cydB Location: 1235687-1236356 bp Feature: domain Description: cydB Location: 1 235687-1 236356 bp Feature: gene Location: 1236917-1237030 bp Ori: QCZ72381.1 Feature: domain Description: cyd_oper_ybgT Location: 1236920-1237007 bp Feature: domain Description: cyd_oper_ybgT Location: 1 236920-1 237007 bp Feature: gene Location: 1237104-1238822 bp Ori: QCZ75192.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1237161-1237395 bp Feature: domain Description: RVT_N Location: 1 2371 61 -1 237395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237449-1238100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 237449-1 2381 00 bp Feature: domain Description: GIIM Note: maturase Location: 1238154-1238385 bp Feature: domain Description: GIIM Note: maturase Location: 1 2381 54-1 238385 bp Feature: domain Description: HNHc Note: nucleases Location: 1238619-1238775 bp Feature: domain Description: HNHc Note: nucleases Location: 1 23861 9-1 238775 bp Feature: gene Location: 1240049-1241425 bp Ori: QCZ72382.1 Feature: domain Description: DUF772 Location: 1240226-1240448 bp Feature: domain Description: DUF772 Location: 1 240226-1 240448 bp Feature: domain Description: DDE_Tnp_1 Location: 1240904-1241312 bp Feature: domain Description: DDE_Tnp_1 Location: 1 240904-1 241 31 2 bp Feature: gene Location: 1241635-1242408 bp Ori: QCZ75193.1 Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 1241728-1242274 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 241 728-1 242274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cydB (TIGR00203), cyd_oper_ybgT (TIGR02106), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), RMtype1_S_SonII-TRD2-CR2_like (cd17246)