myRT

myRT report for GCA_006228565.1_ASM622856v1

Download annotations/find similar RTs

Seq: CP031054.1 Moorella thermoacetica strain 39073-HH chromosome, complete genome (2645661 bp)
Overview 1 RT 1: 2340168-2345194 bp 2 RT 2: 2485900-2489411 bp Neighborhood of RT #1 [2340168, 2345194] PHA02517 InsE RVT-GII GIIM UPF0236 Neighborhood of RT #2 [2485900, 2489542] COG4709 RVT-GII CdaR Polbeta Feature: gene Location: 2340168-2341040 bp Ori: QDA01522.1 Feature: domain Description: PHA02517 Location: 2340318-2340996 bp Feature: domain Description: PHA0251 7 Location: 234031 8-2340996 bp Feature: gene Location: 2341030-2341320 bp Ori: QDA01523.1 Feature: domain Description: InsE Location: 2341039-2341222 bp Feature: domain Description: InsE Location: 2341 039-2341 222 bp Feature: gene Location: 2341868-2343103 bp Ori: QDA01524.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2342123-2342816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23421 23-234281 6 bp Feature: domain Description: GIIM Note: maturase Location: 2342897-2343083 bp Feature: domain Description: GIIM Note: maturase Location: 2342897-2343083 bp Feature: gene Location: 2343182-2344612 bp Ori: QDA01525.1 Feature: domain Description: UPF0236 Location: 2343251-2344511 bp Feature: domain Description: UPF0236 Location: 2343251 -234451 1 bp Feature: gene Location: 2344583-2345194 bp Feature: gene Location: 2485900-2486382 bp Ori: QDA01647.1 Feature: domain Description: COG4709 Location: 2485933-2486308 bp Feature: domain Description: COG4709 Location: 2485933-2486308 bp Feature: gene Location: 2486382-2486498 bp Feature: gene Location: 2487045-2487173 bp Ori: QDA01649.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2487048-2487144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2487048-24871 44 bp Feature: gene Location: 2487320-2488492 bp Ori: QDA01650.1 Gene: cdaR_2 Feature: domain Description: CdaR Location: 2487335-2488472 bp Feature: domain Description: CdaR Location: 2487335-2488472 bp Feature: gene Location: 2489096-2489542 bp Ori: QDA01651.1 Feature: domain Description: Polbeta Location: 2489132-2489411 bp Feature: domain Description: Polbeta Location: 24891 32-248941 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388), UPF0236 (pfam06782), COG4709 (Uncharacterized membrane protein ), CdaR (COG3835), Polbeta (pfam18765)