myRT

myRT report for GCA_006351825.1_ASM635182v1

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Seq: CP040902.1 Longibaculum sp. KGMB06250 chromosome, complete genome (2918948 bp)
Overview 1 RT 1: 390606-394342 bp 2 RT 2: 597708-608207 bp 3 RT 3: 1108667-1114126 bp 4 RT 4: 1634450-1641973 bp 5 RT 5: 2540574-2545717 bp 6 RT 6: 2783434-2787476 bp Neighborhood of RT #1 [390606, 394342] AcrR RVT-GII GIIM Neighborhood of RT #2 [597708, 608239] TPR_1 PHP_HisPPase_AMP SMC_N RVT-UG3 RVT-UG8 mycofact_OYE_2 MqsR_toxin Neighborhood of RT #3 [1108667, 1114146] Met_dep_hydrolase_A HAD_HPP RVT-GII GIIM HTH_BmrR BltR2 COG4832 Neighborhood of RT #4 [1634450, 1641981] GlpG Smf RVT-GII GIIM Aes PRK09279 Neighborhood of RT #5 [2540574, 2545728] GlpR RVT-GII GIIM HK_WalK OmpR Neighborhood of RT #6 [2783434, 2787550] COG3943 Doc RVT-GII GIIM ACD_LpsHSP_like INT_ICEBs1_C_like Feature: gene Location: 390606-391196 bp Feature: gene Location: 391258-391821 bp Feature: domain Description: AcrR Location: 391279-391522 bp Feature: domain Description: AcrR Location: 391 279-391 522 bp Feature: gene Location: 392338-393621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392542-393157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392542-3931 57 bp Feature: domain Description: GIIM Note: maturase Location: 393217-393448 bp Feature: domain Description: GIIM Note: maturase Location: 39321 7-393448 bp Feature: gene Location: 393884-394048 bp Feature: gene Location: 394088-394342 bp Feature: gene Location: 597708-599369 bp Feature: domain Description: TPR_1 Location: 597846-597918 bp Feature: domain Description: TPR_1 Location: 597846-59791 8 bp Feature: gene Location: 599369-601870 bp Feature: domain Description: PHP_HisPPase_AMP Location: 599684-600053 bp Feature: domain Description: PHP_HisPPase_AMP Location: 599684-600053 bp Feature: domain Description: SMC_N Location: 600395-601733 bp Feature: domain Description: SMC_N Location: 600395-601 733 bp Feature: gene Location: 602165-603961 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 602939-603389 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 602939-603389 bp Feature: gene Location: 604088-606070 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 604583-605024 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 604583-605024 bp Feature: gene Location: 606347-607708 bp Feature: domain Description: mycofact_OYE_2 Location: 606350-607700 bp Feature: domain Description: mycofact_OYE_2 Location: 606350-607700 bp Feature: gene Location: 607847-608239 bp Feature: domain Description: MqsR_toxin Location: 607898-608207 bp Feature: domain Description: MqsR_toxin Location: 607898-608207 bp Feature: gene Location: 1108667-1109953 bp Feature: domain Description: Met_dep_hydrolase_A Location: 1108811-1109855 bp Feature: domain Description: Met_dep_hydrolase_A Location: 1 1 0881 1 -1 1 09855 bp Feature: gene Location: 1109964-1110749 bp Feature: domain Description: HAD_HPP Location: 1109976-1110726 bp Feature: domain Description: HAD_HPP Location: 1 1 09976-1 1 1 0726 bp Feature: gene Location: 1111282-1112565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1111486-1112101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 1 486-1 1 1 21 01 bp Feature: domain Description: GIIM Note: maturase Location: 1112161-1112392 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 21 61 -1 1 1 2392 bp Feature: gene Location: 1112710-1113501 bp Feature: domain Description: HTH_BmrR Location: 1112716-1113022 bp Feature: domain Description: HTH_BmrR Location: 1 1 1 271 6-1 1 1 3022 bp Feature: domain Description: BltR2 Location: 1113046-1113496 bp Feature: domain Description: BltR2 Location: 1 1 1 3046-1 1 1 3496 bp Feature: gene Location: 1113514-1114146 bp Feature: domain Description: COG4832 Location: 1113520-1114126 bp Feature: domain Description: COG4832 Location: 1 1 1 3520-1 1 1 41 26 bp Feature: gene Location: 1634450-1635064 bp Feature: domain Description: GlpG Location: 1634471-1635047 bp Feature: domain Description: GlpG Location: 1 634471 -1 635047 bp Feature: gene Location: 1635048-1636064 bp Feature: domain Description: Smf Location: 1635282-1635870 bp Feature: domain Description: Smf Location: 1 635282-1 635870 bp Feature: gene Location: 1636167-1637450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1636371-1636986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 636371 -1 636986 bp Feature: domain Description: GIIM Note: maturase Location: 1637046-1637277 bp Feature: domain Description: GIIM Note: maturase Location: 1 637046-1 637277 bp Feature: gene Location: 1638344-1639243 bp Feature: domain Description: Aes Location: 1638485-1639175 bp Feature: domain Description: Aes Location: 1 638485-1 6391 75 bp Feature: gene Location: 1639348-1641981 bp Feature: domain Description: PRK09279 Location: 1639351-1641973 bp Feature: domain Description: PRK09279 Location: 1 639351 -1 641 973 bp Feature: gene Location: 2540574-2541338 bp Feature: domain Description: GlpR Location: 2540577-2541336 bp Feature: domain Description: GlpR Location: 2540577-2541 336 bp Feature: gene Location: 2541344-2541478 bp Feature: gene Location: 2541568-2542851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2541772-2542387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2541 772-2542387 bp Feature: domain Description: GIIM Note: maturase Location: 2542447-2542678 bp Feature: domain Description: GIIM Note: maturase Location: 2542447-2542678 bp Feature: gene Location: 2543355-2545046 bp Feature: domain Description: HK_WalK Location: 2543397-2545029 bp Feature: domain Description: HK_WalK Location: 2543397-2545029 bp Feature: gene Location: 2545048-2545728 bp Feature: domain Description: OmpR Location: 2545063-2545717 bp Feature: domain Description: OmpR Location: 2545063-254571 7 bp Feature: gene Location: 2783434-2783760 bp Feature: domain Description: COG3943 Location: 2783524-2783695 bp Feature: domain Description: COG3943 Location: 2783524-2783695 bp Feature: gene Location: 2783907-2784449 bp Feature: domain Description: Doc Location: 2784081-2784348 bp Feature: domain Description: Doc Location: 2784081 -2784348 bp Feature: gene Location: 2784520-2785803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2784724-2785339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2784724-2785339 bp Feature: domain Description: GIIM Note: maturase Location: 2785399-2785630 bp Feature: domain Description: GIIM Note: maturase Location: 2785399-2785630 bp Feature: gene Location: 2786320-2786769 bp Feature: domain Description: ACD_LpsHSP_like Location: 2786437-2786722 bp Feature: domain Description: ACD_LpsHSP_like Location: 2786437-2786722 bp Feature: gene Location: 2787086-2787550 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2787095-2787476 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 2787095-2787476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII, GIIM (pfam08388), TPR_1 (pfam00515), PHP_HisPPase_AMP (cd07438), SMC_N (pfam02463), RVT-UG3, RVT-UG8, mycofact_OYE_2 (TIGR03997), MqsR_toxin (pfam15723)
Met_dep_hydrolase_A (cd01299), HAD_HPP (cd07517), HTH_BmrR (cd01107), BltR2 (COG4978), COG4832 (Uncharacterized protein ), GlpG (COG0705), Smf (COG0758), Aes (COG0657), PRK09279 (pyruvate phosphate dikinase; Provisional), GlpR (COG1349)
HK_WalK (NF033092), OmpR (COG0745), COG3943 (Uncharacterized conserved protein ), Doc (COG3654), ACD_LpsHSP_like (cd06471), INT_ICEBs1_C_like (cd01189)