myRT

myRT report for GCA_006385935.1_ASM638593v1

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Seq: CP041066.1 Bacillus megaterium strain KNU-01 chromosome, complete genome (5154879 bp)
Overview 1 RT 1: 2346416-2350536 bp 2 RT 2: 3379532-3386181 bp Neighborhood of RT #1 [2346416, 2350589] RVT_N RVT-GII GIIM AcrR TetR_C_8 Neighborhood of RT #2 [3379532, 3386186] AraJ LysR RVT_N RVT-GII Spore_permease ARA1 PRK07041 Feature: gene Location: 2346416-2346955 bp Feature: gene Location: 2346979-2347347 bp Feature: gene Location: 2347592-2349241 bp Feature: domain Description: RVT_N Location: 2347640-2347886 bp Feature: domain Description: RVT_N Location: 2347640-2347886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2347940-2348600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2347940-2348600 bp Feature: domain Description: GIIM Note: maturase Location: 2348669-2348900 bp Feature: domain Description: GIIM Note: maturase Location: 2348669-2348900 bp Feature: gene Location: 2349261-2349461 bp Feature: gene Location: 2349972-2350589 bp Feature: domain Description: AcrR Location: 2350002-2350191 bp Feature: domain Description: AcrR Location: 2350002-23501 91 bp Feature: domain Description: TetR_C_8 Location: 2350263-2350536 bp Feature: domain Description: TetR_C_8 Location: 2350263-2350536 bp Feature: gene Location: 3379532-3380737 bp Feature: domain Description: AraJ Location: 3379562-3380729 bp Feature: domain Description: AraJ Location: 3379562-3380729 bp Feature: gene Location: 3381042-3381935 bp Feature: domain Description: LysR Location: 3381045-3381918 bp Feature: domain Description: LysR Location: 3381 045-3381 91 8 bp Feature: gene Location: 3382834-3384156 bp Feature: domain Description: RVT_N Location: 3382852-3383074 bp Feature: domain Description: RVT_N Location: 3382852-3383074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3383128-3383554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33831 28-3383554 bp Feature: domain Description: Spore_permease Location: 3383554-3384049 bp Feature: domain Description: Spore_permease Location: 3383554-3384049 bp Feature: gene Location: 3384299-3385189 bp Feature: domain Description: ARA1 Location: 3384350-3385166 bp Feature: domain Description: ARA1 Location: 3384350-33851 66 bp Feature: gene Location: 3385446-3386186 bp Feature: domain Description: PRK07041 Location: 3385497-3386181 bp Feature: domain Description: PRK07041 Location: 3385497-33861 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AcrR (COG1309), TetR_C_8 (pfam14278), AraJ (COG2814), LysR (COG0583), Spore_permease (pfam03845), ARA1 (COG0656), PRK07041 (SDR family oxidoreductase)

Seq: CP041064.1 Bacillus megaterium strain KNU-01 plasmid pKNU_01_1, complete sequence (132529 bp)
Overview 1 RT 1: 10184-13976 bp 2 RT 2: 53876-60034 bp Neighborhood of RT #1 [10184, 13976] HxlR MdaB RVT_N RVT-GII GIIM Neighborhood of RT #2 [53876, 60034] spore_ger_x_C RVT_N RVT-GII GIIM Feature: gene Location: 10184-10552 bp Feature: domain Description: HxlR Location: 10238-10529 bp Feature: domain Description: HxlR Location: 102 38-1052 9 bp Feature: gene Location: 10625-11152 bp Feature: domain Description: MdaB Location: 10628-11144 bp Feature: domain Description: MdaB Location: 1062 8-11144 bp Feature: gene Location: 11957-13642 bp Feature: domain Description: RVT_N Location: 12041-12287 bp Feature: domain Description: RVT_N Location: 12 041-12 2 87 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12341-13001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 341-13001 bp Feature: domain Description: GIIM Note: maturase Location: 13067-13301 bp Feature: domain Description: GIIM Note: maturase Location: 13067-13301 bp Feature: gene Location: 13674-13823 bp Feature: gene Location: 13839-13976 bp Feature: gene Location: 53876-55102 bp Feature: domain Description: spore_ger_x_C Location: 53900-55061 bp Feature: domain Description: spore_ger_x_C Location: 53900-55061 bp Feature: gene Location: 56370-56570 bp Feature: gene Location: 56590-58239 bp Feature: domain Description: RVT_N Location: 56638-56884 bp Feature: domain Description: RVT_N Location: 56638-56884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56938-57598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56938-57598 bp Feature: domain Description: GIIM Note: maturase Location: 57667-57898 bp Feature: domain Description: GIIM Note: maturase Location: 57667-57898 bp Feature: gene Location: 58590-59234 bp Feature: gene Location: 59747-60034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), MdaB (COG2249), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), spore_ger_x_C (TIGR02887)

Seq: CP041067.1 Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence (102357 bp)
Overview 1 RT 1: 83064-86760 bp Neighborhood of RT #1 [83064, 86789] DUF2185 RVT_N RVT-GII GIIM PadR Feature: gene Location: 83064-83417 bp Feature: domain Description: DUF2185 Location: 83148-83400 bp Feature: domain Description: DUF2185 Location: 83 148-83 400 bp Feature: gene Location: 83530-83850 bp Feature: gene Location: 84044-85693 bp Feature: domain Description: RVT_N Location: 84092-84338 bp Feature: domain Description: RVT_N Location: 84092-843 3 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84392-85052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 843 92-85052 bp Feature: domain Description: GIIM Note: maturase Location: 85121-85352 bp Feature: domain Description: GIIM Note: maturase Location: 85121-853 52 bp Feature: gene Location: 85713-85913 bp Feature: gene Location: 86454-86789 bp Feature: domain Description: PadR Location: 86505-86760 bp Feature: domain Description: PadR Location: 86505-86760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2185 (pfam09951), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PadR (pfam03551)