myRT

myRT report for GCA_006457285.1_ASM645728v1

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Seq: CP041071.1 Bacillus tropicus strain LM1212-W3 chromosome, complete genome (5631167 bp)
Overview 1 RT 1: 1682398-1688495 bp 2 RT 2: 5543193-5551052 bp Neighborhood of RT #1 [1682398, 1688506] Nfu_N Virulence_fact HEAT PRK06752 RVT-GII GIIM HNHc DUF4318 BaxI_1 Neighborhood of RT #2 [5543193, 5551052] zf-IS66 DDE_Tnp_IS66 RVT-GII PRK07726 Feature: gene Location: 1682398-1683525 bp Ori: QDF23108.1 Feature: domain Description: Nfu_N Location: 1682416-1682662 bp Feature: domain Description: Nfu_N Location: 1 68241 6-1 682662 bp Feature: domain Description: Virulence_fact Location: 1682719-1682953 bp Feature: domain Description: Virulence_fact Location: 1 68271 9-1 682953 bp Feature: domain Description: HEAT Location: 1683058-1683514 bp Feature: domain Description: HEAT Location: 1 683058-1 68351 4 bp Feature: gene Location: 1684074-1684361 bp Feature: domain Description: PRK06752 Location: 1684077-1684359 bp Feature: domain Description: PRK06752 Location: 1 684077-1 684359 bp Feature: gene Location: 1684594-1686456 bp Ori: QDF23109.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1684888-1685593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 684888-1 685593 bp Feature: domain Description: GIIM Note: maturase Location: 1685692-1685899 bp Feature: domain Description: GIIM Note: maturase Location: 1 685692-1 685899 bp Feature: domain Description: HNHc Note: nucleases Location: 1686202-1686376 bp Feature: domain Description: HNHc Note: nucleases Location: 1 686202-1 686376 bp Feature: gene Location: 1687414-1687668 bp Ori: QDF23110.1 Feature: domain Description: DUF4318 Location: 1687459-1687666 bp Feature: domain Description: DUF431 8 Location: 1 687459-1 687666 bp Feature: gene Location: 1687775-1688506 bp Ori: QDF23111.1 Feature: domain Description: BaxI_1 Location: 1687790-1688495 bp Feature: domain Description: BaxI_1 Location: 1 687790-1 688495 bp Feature: gene Location: 5543193-5544596 bp Ori: QDF26835.1 Feature: domain Description: zf-IS66 Location: 5543490-5543622 bp Feature: domain Description: zf-IS66 Location: 5543490-5543622 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5543670-5544477 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5543670-5544477 bp Feature: gene Location: 5544855-5545396 bp Feature: gene Location: 5546099-5547976 bp Ori: QDF26836.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5546420-5547158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5546420-55471 58 bp Feature: gene Location: 5548108-5549742 bp Ori: QDF26837.1 Feature: domain Description: PRK07726 Location: 5548144-5549539 bp Feature: domain Description: PRK07726 Location: 55481 44-5549539 bp Feature: gene Location: 5550330-5551052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nfu_N (smart00932), Virulence_fact (pfam13769), HEAT (sd00044), PRK06752 (single-stranded DNA-binding protein; Validated), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF4318 (pfam14201), BaxI_1 (pfam12811), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050), PRK07726 (DNA topoisomerase 3)

Seq: CP041075.1 Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence (157863 bp)
Overview 1 RT 1: 67558-71895 bp Neighborhood of RT #1 [67558, 71895] PRK06751 RVT-GII GIIM HNHc HTH_17 Feature: gene Location: 67558-67800 bp Feature: gene Location: 67847-68299 bp Gene: ssb Feature: domain Description: PRK06751 Location: 67850-68297 bp Feature: domain Description: PRK06751 Location: 67850-682 97 bp Feature: gene Location: 68532-70394 bp Ori: QDF27280.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68826-69531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6882 6-69531 bp Feature: domain Description: GIIM Note: maturase Location: 69630-69837 bp Feature: domain Description: GIIM Note: maturase Location: 69630-69837 bp Feature: domain Description: HNHc Note: nucleases Location: 70140-70314 bp Feature: domain Description: HNHc Note: nucleases Location: 70140-70314 bp Feature: gene Location: 71221-71460 bp Ori: QDF27281.1 Feature: domain Description: HTH_17 Location: 71242-71443 bp Feature: domain Description: HTH_17 Location: 712 42 -71443 bp Feature: gene Location: 71707-71895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06751 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HTH_17 (pfam12728)