myRT

myRT report for GCA_006459145.1_ASM645914v1

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Seq: CP041084.1 Klebsiella pneumoniae strain Kp202 plasmid pKp202_2, complete sequence (158439 bp)
Overview 1 RT 1: 85366-88453 bp 2 RT 2: 148405-151486 bp Neighborhood of RT #1 [85366, 88862] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [148405, 151500] DUF1472 RVT-GII PRK10276 Feature: gene Location: 85366-85467 bp Feature: gene Location: 85433-85915 bp Feature: domain Description: PHA02517 Location: 85451-85889 bp Feature: domain Description: PHA0251 7 Location: 85451 -85889 bp Feature: gene Location: 85984-87492 bp Ori: QDF35910.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86242-86974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86242-86974 bp Feature: domain Description: GIIM Note: maturase Location: 87049-87247 bp Feature: domain Description: GIIM Note: maturase Location: 87049-87247 bp Feature: gene Location: 87801-88205 bp Feature: gene Location: 88156-88862 bp Feature: domain Description: InsE Location: 88180-88453 bp Feature: domain Description: InsE Location: 881 80-88453 bp Feature: gene Location: 148405-148497 bp Feature: domain Description: DUF1472 Location: 148417-148483 bp Feature: domain Description: DUF1 472 Location: 1 4841 7-1 48483 bp Feature: gene Location: 148721-148951 bp Feature: gene Location: 149185-150669 bp Ori: QDF35896.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149587-150277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 49587-1 50277 bp Feature: gene Location: 150669-150920 bp Feature: gene Location: 151075-151500 bp Ori: QDF35898.1 Gene: umuD Feature: domain Description: PRK10276 Location: 151078-151486 bp Feature: domain Description: PRK1 0276 Location: 1 51 078-1 51 486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), DUF1472 (pfam07339), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP041082.1 Klebsiella pneumoniae strain Kp202, complete genome (5462019 bp)
Overview 1 RT 1: 1853600-1859727 bp 2 RT 2: 3262907-3265738 bp Neighborhood of RT #1 [1853600, 1859727] Nuc_deoxyrib_tr RVT-Retrons AAA_21 AAA_21 Neighborhood of RT #2 [3262907, 3265749] PRK10276 RVT-GII DinI Feature: gene Location: 1853600-1854469 bp Ori: QDF32094.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 1854122-1854293 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 185412 2 -18542 93 bp Feature: gene Location: 1854489-1854644 bp Feature: gene Location: 1855125-1856225 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1855308-1855662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1855308-1855662 bp Feature: gene Location: 1856340-1858584 bp Feature: domain Description: AAA_21 Location: 1856415-1856481 bp Feature: domain Description: AAA_2 1 Location: 1856415-1856481 bp Feature: domain Description: AAA_21 Location: 1857132-1857354 bp Feature: domain Description: AAA_2 1 Location: 1857132 -1857354 bp Feature: gene Location: 1859497-1859727 bp Feature: gene Location: 3262907-3263326 bp Ori: QDF33363.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3262910-3263321 bp Feature: domain Description: PRK102 76 Location: 32 62 910-32 6332 1 bp Feature: gene Location: 3263304-3263489 bp Feature: gene Location: 3263405-3264889 bp Ori: QDF33365.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3263807-3264497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 63807-32 64497 bp Feature: gene Location: 3264889-3265140 bp Feature: gene Location: 3265507-3265749 bp Ori: QDF33367.1 Feature: domain Description: DinI Location: 3265558-3265738 bp Feature: domain Description: DinI Location: 32 65558-32 65738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_21 (pfam13304), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183)

Seq: CP041086.1 Klebsiella pneumoniae strain Kp202 plasmid pKp202_4, complete sequence (61718 bp)
Overview 1 RT 1: 2970-6459 bp 2 RT 2: 21851-25593 bp Neighborhood of RT #1 [2970, 6459] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [21851, 25610] ArdC RVT-GII PRK10276 Feature: gene Location: 2970-3658 bp Feature: domain Description: InsE Location: 2979-3264 bp Feature: domain Description: InsE Location: 2979-3 264 bp Feature: gene Location: 3654-4022 bp Feature: gene Location: 4331-5839 bp Ori: QDF36058.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4589-5321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4589-53 21 bp Feature: domain Description: GIIM Note: maturase Location: 5396-5594 bp Feature: domain Description: GIIM Note: maturase Location: 53 96-5594 bp Feature: gene Location: 5920-6099 bp Feature: domain Description: PHA02517 Location: 5923-6100 bp Feature: domain Description: PHA02517 Location: 5923 -6100 bp Feature: gene Location: 6247-6459 bp Feature: gene Location: 21851-22816 bp Ori: QDF36014.1 Feature: domain Description: ArdC Location: 21977-22811 bp Feature: domain Description: ArdC Location: 21977-22811 bp Feature: gene Location: 23024-23293 bp Feature: gene Location: 23286-24770 bp Ori: QDF36016.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23688-24378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 688-243 78 bp Feature: gene Location: 24770-25021 bp Feature: gene Location: 25179-25610 bp Ori: QDF36018.1 Gene: umuD Feature: domain Description: PRK10276 Location: 25230-25593 bp Feature: domain Description: PRK10276 Location: 2523 0-25593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), ArdC (COG4227), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)