myRT

myRT report for GCA_006496635.1_ASM649663v1

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Seq: CP022958.1 Azoarcus sp. DD4 chromosome, complete genome (5400077 bp)
Overview 1 RT 1: 2241468-2252012 bp 2 RT 2: 2877046-2883457 bp Neighborhood of RT #1 [2241468, 2252503] Peptidase_C92 RVT-GII PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM DUF4297 SMC_prok_B SMC_prok_B Neighborhood of RT #2 [2877046, 2883540] ArsC_ArsC COG3975 RVT-GII PRK10664 PRK10787 Feature: gene Location: 2241468-2242751 bp Ori: QDF96917.1 Feature: domain Description: Peptidase_C92 Location: 2241537-2241915 bp Feature: domain Description: Peptidase_C92 Location: 2241 537-2241 91 5 bp Feature: gene Location: 2243347-2244117 bp Feature: gene Location: 2245047-2245520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2245296-2245521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2245296-2245521 bp Feature: gene Location: 2245550-2247763 bp Ori: QDF96919.1 Feature: domain Description: PinE Location: 2245601-2246183 bp Feature: domain Description: PinE Location: 2245601 -22461 83 bp Feature: domain Description: Zn_ribbon_recom Location: 2246546-2246717 bp Feature: domain Description: Zn_ribbon_recom Location: 2246546-224671 7 bp Feature: domain Description: HTH_17 Location: 2247425-2247548 bp Feature: domain Description: HTH_1 7 Location: 2247425-2247548 bp Feature: domain Description: HTH_17 Location: 2247608-2247722 bp Feature: domain Description: HTH_1 7 Location: 2247608-2247722 bp Feature: gene Location: 2248233-2249042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2248236-2248671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2248236-2248671 bp Feature: domain Description: GIIM Note: maturase Location: 2248740-2248950 bp Feature: domain Description: GIIM Note: maturase Location: 2248740-2248950 bp Feature: gene Location: 2249580-2250782 bp Ori: QDF96920.1 Feature: domain Description: DUF4297 Location: 2249664-2250297 bp Feature: domain Description: DUF4297 Location: 2249664-2250297 bp Feature: gene Location: 2250779-2252503 bp Ori: QDF96921.1 Feature: domain Description: SMC_prok_B Location: 2250872-2250932 bp Feature: domain Description: SMC_prok_B Location: 2250872-2250932 bp Feature: domain Description: SMC_prok_B Location: 2251358-2252012 bp Feature: domain Description: SMC_prok_B Location: 2251 358-225201 2 bp Feature: gene Location: 2877046-2877399 bp Ori: QDF97420.1 Gene: arsC Feature: domain Description: ArsC_ArsC Location: 2877058-2877388 bp Feature: domain Description: ArsC_ArsC Location: 2877058-2877388 bp Feature: gene Location: 2877422-2879239 bp Ori: QDF97421.1 Feature: domain Description: COG3975 Location: 2877446-2879222 bp Feature: domain Description: COG3975 Location: 2877446-2879222 bp Feature: gene Location: 2879801-2879986 bp Ori: QDF97422.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2879813-2879966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287981 3-2879966 bp Feature: gene Location: 2880651-2880923 bp Ori: QDF97423.1 Feature: domain Description: PRK10664 Location: 2880654-2880921 bp Feature: domain Description: PRK1 0664 Location: 2880654-2880921 bp Feature: gene Location: 2881120-2883540 bp Ori: QDF97424.1 Feature: domain Description: PRK10787 Location: 2881150-2883457 bp Feature: domain Description: PRK1 0787 Location: 2881 1 50-2883457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C92 (pfam05708), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), GIIM (pfam08388), DUF4297 (pfam14130), SMC_prok_B (TIGR02168), ArsC_ArsC (cd03034), COG3975 (Predicted metalloprotease, contains C-terminal PDZ domain )
PRK10664 (DNA-binding protein HU-beta), PRK10787 (DNA-binding ATP-dependent protease La; Provisional)