myRT

myRT report for GCA_006542705.1_Aond_2.0

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Seq: AP019737.1 Alistipes sp. 5CPYCFAH4 DNA, complete genome (3312673 bp)
Overview 1 RT 1: 336619-342131 bp 2 RT 2: 1601000-1604290 bp 3 RT 3: 2316379-2324218 bp 4 RT 4: 2527198-2535656 bp Neighborhood of RT #1 [336619, 342142] DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Neighborhood of RT #2 [1601000, 1604310] RVT-GII Relaxase Neighborhood of RT #3 [2316379, 2324247] ZIP_Gal4-like_1 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #4 [2527198, 2535700] DUF3876 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Feature: gene Location: 336619-336942 bp Ori: BBL08076.1 Feature: domain Description: DUF4133 Location: 336634-336901 bp Feature: domain Description: DUF41 33 Location: 336634-336901 bp Feature: gene Location: 336939-337877 bp Ori: BBL08077.1 Feature: domain Description: Bac_Flav_CT_G Location: 336942-337863 bp Feature: domain Description: Bac_Flav_CT_G Location: 336942-337863 bp Feature: gene Location: 338461-340122 bp Ori: BBL08078.1 Feature: domain Description: RVT_N Location: 338515-338758 bp Feature: domain Description: RVT_N Location: 33851 5-338758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338803-339451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338803-339451 bp Feature: domain Description: GIIM Note: maturase Location: 339505-339736 bp Feature: domain Description: GIIM Note: maturase Location: 339505-339736 bp Feature: gene Location: 340119-341813 bp Ori: BBL08079.1 Feature: domain Description: Bac_Flav_CT_G Location: 340239-341805 bp Feature: domain Description: Bac_Flav_CT_G Location: 340239-341 805 bp Feature: gene Location: 341828-342142 bp Ori: BBL08080.1 Feature: domain Description: DUF3876 Location: 341882-342131 bp Feature: domain Description: DUF3876 Location: 341 882-3421 31 bp Feature: gene Location: 1601000-1601287 bp Feature: gene Location: 1601712-1601876 bp Feature: gene Location: 1601932-1603152 bp Ori: BBL09149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602097-1602919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 602097-1 60291 9 bp Feature: gene Location: 1603628-1603909 bp Feature: gene Location: 1603936-1604310 bp Ori: BBL09151.1 Feature: domain Description: Relaxase Location: 1603990-1604290 bp Feature: domain Description: Relaxase Location: 1 603990-1 604290 bp Feature: gene Location: 2316379-2316513 bp Ori: BBL09724.1 Feature: domain Description: ZIP_Gal4-like_1 Location: 2316436-2316490 bp Feature: domain Description: ZIP_Gal4-like_1 Location: 231 6436-231 6490 bp Feature: gene Location: 2316531-2316932 bp Ori: BBL09725.1 Feature: domain Description: Bac_Flav_CT_G Location: 2316537-2316915 bp Feature: domain Description: Bac_Flav_CT_G Location: 231 6537-231 691 5 bp Feature: gene Location: 2317080-2318906 bp Ori: BBL09726.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2317365-2318187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 7365-231 81 87 bp Feature: domain Description: Intron_maturas2 Location: 2318259-2318586 bp Feature: domain Description: Intron_maturas2 Location: 231 8259-231 8586 bp Feature: domain Description: HNHc Note: nucleases Location: 2318736-2318883 bp Feature: domain Description: HNHc Note: nucleases Location: 231 8736-231 8883 bp Feature: gene Location: 2319432-2320793 bp Ori: BBL09727.1 Feature: domain Description: Bac_Flav_CT_G Location: 2319516-2320782 bp Feature: domain Description: Bac_Flav_CT_G Location: 231 951 6-2320782 bp Feature: gene Location: 2320807-2322489 bp Ori: BBL09728.1 Feature: domain Description: RVT_N Location: 2320870-2321113 bp Feature: domain Description: RVT_N Location: 2320870-2321 1 1 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321158-2321806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321 1 58-2321 806 bp Feature: domain Description: GIIM Note: maturase Location: 2321857-2322091 bp Feature: domain Description: GIIM Note: maturase Location: 2321 857-2322091 bp Feature: gene Location: 2323095-2323832 bp Ori: BBL09729.1 Feature: domain Description: Bac_Flav_CT_G Location: 2323098-2323815 bp Feature: domain Description: Bac_Flav_CT_G Location: 2323098-232381 5 bp Feature: gene Location: 2323933-2324247 bp Ori: BBL09730.1 Feature: domain Description: DUF4133 Location: 2323951-2324218 bp Feature: domain Description: DUF41 33 Location: 2323951 -232421 8 bp Feature: gene Location: 2527198-2527629 bp Feature: gene Location: 2527622-2527978 bp Ori: BBL09911.1 Feature: domain Description: DUF3876 Location: 2527703-2527952 bp Feature: domain Description: DUF3876 Location: 2527703-2527952 bp Feature: gene Location: 2528216-2529940 bp Ori: BBL09912.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2528381-2529203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2528381 -2529203 bp Feature: domain Description: Intron_maturas2 Location: 2529380-2529581 bp Feature: domain Description: Intron_maturas2 Location: 2529380-2529581 bp Feature: domain Description: HNHc Note: nucleases Location: 2529731-2529902 bp Feature: domain Description: HNHc Note: nucleases Location: 2529731 -2529902 bp Feature: gene Location: 2530588-2532180 bp Ori: BBL09913.1 Feature: domain Description: Bac_Flav_CT_G Location: 2530708-2532172 bp Feature: domain Description: Bac_Flav_CT_G Location: 2530708-25321 72 bp Feature: gene Location: 2532177-2533838 bp Ori: BBL09914.1 Feature: domain Description: RVT_N Location: 2532231-2532474 bp Feature: domain Description: RVT_N Location: 2532231 -2532474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532519-2533167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253251 9-25331 67 bp Feature: domain Description: GIIM Note: maturase Location: 2533221-2533452 bp Feature: domain Description: GIIM Note: maturase Location: 2533221 -2533452 bp Feature: gene Location: 2534422-2535366 bp Ori: BBL09915.1 Feature: domain Description: Bac_Flav_CT_G Location: 2534425-2535352 bp Feature: domain Description: Bac_Flav_CT_G Location: 2534425-2535352 bp Feature: gene Location: 2535371-2535700 bp Ori: BBL09916.1 Feature: domain Description: DUF4133 Location: 2535389-2535656 bp Feature: domain Description: DUF41 33 Location: 2535389-2535656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992), Relaxase (pfam03432), ZIP_Gal4-like_1 (cd14724), Intron_maturas2 (pfam01348), HNHc (smart00507)