myRT

myRT report for GCA_006542745.1_6CPBBH3

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Seq: AP019739.1 Alistipes sp. 6CPBBH3 DNA, complete genome (3302129 bp)
Overview 1 RT 1: 412861-423080 bp 2 RT 2: 964965-970560 bp 3 RT 3: 1894280-1900186 bp 4 RT 4: 1904267-1909779 bp 5 RT 5: 2399665-2407706 bp 6 RT 6: 2869788-2874770 bp Neighborhood of RT #1 [412861, 423109] ZIP_Gal4-like_1 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #2 [964965, 970598] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #3 [1894280, 1900293] Imm17 TraG-D_C RVT_N RVT-GII GIIM YWFCY Relaxase Relaxase Neighborhood of RT #4 [1904267, 1909790] DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Neighborhood of RT #5 [2399665, 2407738] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 Neighborhood of RT #6 [2869788, 2874770] RVT-UG27 Feature: gene Location: 412861-412995 bp Ori: BBL13694.1 Feature: domain Description: ZIP_Gal4-like_1 Location: 412918-412972 bp Feature: domain Description: ZIP_Gal4-like_1 Location: 41 291 8-41 2972 bp Feature: gene Location: 413013-413414 bp Ori: BBL13695.1 Feature: domain Description: Bac_Flav_CT_G Location: 413019-413397 bp Feature: domain Description: Bac_Flav_CT_G Location: 41 301 9-41 3397 bp Feature: gene Location: 413563-415389 bp Ori: BBL13696.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413848-414670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 3848-41 4670 bp Feature: domain Description: Intron_maturas2 Location: 414742-415066 bp Feature: domain Description: Intron_maturas2 Location: 41 4742-41 5066 bp Feature: domain Description: HNHc Note: nucleases Location: 415219-415366 bp Feature: domain Description: HNHc Note: nucleases Location: 41 521 9-41 5366 bp Feature: gene Location: 415915-417204 bp Ori: BBL13697.1 Feature: domain Description: Bac_Flav_CT_G Location: 416035-417193 bp Feature: domain Description: Bac_Flav_CT_G Location: 41 6035-41 71 93 bp Feature: gene Location: 417201-418862 bp Ori: BBL13698.1 Feature: domain Description: RVT_N Location: 417255-417498 bp Feature: domain Description: RVT_N Location: 41 7255-41 7498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417543-418191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 7543-41 81 91 bp Feature: domain Description: GIIM Note: maturase Location: 418245-418476 bp Feature: domain Description: GIIM Note: maturase Location: 41 8245-41 8476 bp Feature: gene Location: 419446-419685 bp Ori: BBL13699.1 Feature: domain Description: Bac_Flav_CT_G Location: 419560-419671 bp Feature: domain Description: Bac_Flav_CT_G Location: 41 9560-41 9671 bp Feature: gene Location: 419669-421351 bp Ori: BBL13700.1 Feature: domain Description: RVT_N Location: 419732-419975 bp Feature: domain Description: RVT_N Location: 41 9732-41 9975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420020-420668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420020-420668 bp Feature: domain Description: GIIM Note: maturase Location: 420719-420953 bp Feature: domain Description: GIIM Note: maturase Location: 42071 9-420953 bp Feature: gene Location: 421957-422694 bp Ori: BBL13701.1 Feature: domain Description: Bac_Flav_CT_G Location: 421960-422677 bp Feature: domain Description: Bac_Flav_CT_G Location: 421 960-422677 bp Feature: gene Location: 422795-423109 bp Ori: BBL13702.1 Feature: domain Description: DUF4133 Location: 422813-423080 bp Feature: domain Description: DUF41 33 Location: 42281 3-423080 bp Feature: gene Location: 964965-965345 bp Ori: BBL14123.1 Feature: domain Description: DUF3876 Location: 965046-965310 bp Feature: domain Description: DUF3876 Location: 965046-96531 0 bp Feature: gene Location: 965386-967089 bp Ori: BBL14124.1 Feature: domain Description: Bac_Flav_CT_G Location: 965506-967072 bp Feature: domain Description: Bac_Flav_CT_G Location: 965506-967072 bp Feature: gene Location: 967086-968747 bp Ori: BBL14125.1 Feature: domain Description: RVT_N Location: 967140-967383 bp Feature: domain Description: RVT_N Location: 9671 40-967383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967428-968076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967428-968076 bp Feature: domain Description: GIIM Note: maturase Location: 968130-968361 bp Feature: domain Description: GIIM Note: maturase Location: 9681 30-968361 bp Feature: gene Location: 969331-970269 bp Ori: BBL14126.1 Feature: domain Description: Bac_Flav_CT_G Location: 969334-970255 bp Feature: domain Description: Bac_Flav_CT_G Location: 969334-970255 bp Feature: gene Location: 970272-970598 bp Ori: BBL14127.1 Feature: domain Description: DUF4133 Location: 970290-970560 bp Feature: domain Description: DUF41 33 Location: 970290-970560 bp Feature: gene Location: 1894280-1894561 bp Ori: BBL14905.1 Feature: domain Description: Imm17 Location: 1894370-1894547 bp Feature: domain Description: Imm1 7 Location: 1 894370-1 894547 bp Feature: gene Location: 1894716-1896116 bp Ori: BBL14906.1 Feature: domain Description: TraG-D_C Location: 1895490-1895823 bp Feature: domain Description: TraG-D_C Location: 1 895490-1 895823 bp Feature: gene Location: 1896113-1897768 bp Ori: BBL14907.1 Feature: domain Description: RVT_N Location: 1896167-1896410 bp Feature: domain Description: RVT_N Location: 1 8961 67-1 89641 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1896455-1897100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 896455-1 8971 00 bp Feature: domain Description: GIIM Note: maturase Location: 1897151-1897385 bp Feature: domain Description: GIIM Note: maturase Location: 1 8971 51 -1 897385 bp Feature: gene Location: 1898388-1899062 bp Ori: BBL14908.1 Feature: domain Description: YWFCY Location: 1898391-1898523 bp Feature: domain Description: YWFCY Location: 1 898391 -1 898523 bp Feature: gene Location: 1899148-1900293 bp Ori: BBL14909.1 Feature: domain Description: Relaxase Location: 1899334-1899649 bp Feature: domain Description: Relaxase Location: 1 899334-1 899649 bp Feature: domain Description: Relaxase Location: 1899949-1900186 bp Feature: domain Description: Relaxase Location: 1 899949-1 9001 86 bp Feature: gene Location: 1904267-1904590 bp Ori: BBL14916.1 Feature: domain Description: DUF4133 Location: 1904282-1904549 bp Feature: domain Description: DUF41 33 Location: 1 904282-1 904549 bp Feature: gene Location: 1904587-1905525 bp Ori: BBL14917.1 Feature: domain Description: Bac_Flav_CT_G Location: 1904590-1905511 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 904590-1 90551 1 bp Feature: gene Location: 1906109-1907770 bp Ori: BBL14918.1 Feature: domain Description: RVT_N Location: 1906163-1906406 bp Feature: domain Description: RVT_N Location: 1 9061 63-1 906406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1906451-1907099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 906451 -1 907099 bp Feature: domain Description: GIIM Note: maturase Location: 1907153-1907384 bp Feature: domain Description: GIIM Note: maturase Location: 1 9071 53-1 907384 bp Feature: gene Location: 1907767-1909461 bp Ori: BBL14919.1 Feature: domain Description: Bac_Flav_CT_G Location: 1907887-1909453 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 907887-1 909453 bp Feature: gene Location: 1909476-1909790 bp Ori: BBL14920.1 Feature: domain Description: DUF3876 Location: 1909530-1909779 bp Feature: domain Description: DUF3876 Location: 1 909530-1 909779 bp Feature: gene Location: 2399665-2400018 bp Feature: gene Location: 2400023-2400472 bp Ori: BBL15353.1 Feature: domain Description: Bac_Flav_CT_G Location: 2400035-2400449 bp Feature: domain Description: Bac_Flav_CT_G Location: 2400035-2400449 bp Feature: gene Location: 2400575-2402401 bp Ori: BBL15354.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2400860-2401682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2400860-2401 682 bp Feature: domain Description: Intron_maturas2 Location: 2401754-2402084 bp Feature: domain Description: Intron_maturas2 Location: 2401 754-2402084 bp Feature: domain Description: HNHc Note: nucleases Location: 2402231-2402378 bp Feature: domain Description: HNHc Note: nucleases Location: 2402231 -2402378 bp Feature: gene Location: 2402927-2404288 bp Ori: BBL15355.1 Feature: domain Description: Bac_Flav_CT_G Location: 2403011-2404277 bp Feature: domain Description: Bac_Flav_CT_G Location: 240301 1 -2404277 bp Feature: gene Location: 2404302-2405984 bp Ori: BBL15356.1 Feature: domain Description: RVT_N Location: 2404365-2404608 bp Feature: domain Description: RVT_N Location: 2404365-2404608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2404653-2405301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2404653-2405301 bp Feature: domain Description: GIIM Note: maturase Location: 2405352-2405586 bp Feature: domain Description: GIIM Note: maturase Location: 2405352-2405586 bp Feature: gene Location: 2406590-2407420 bp Ori: BBL15357.1 Feature: domain Description: Bac_Flav_CT_G Location: 2406593-2407403 bp Feature: domain Description: Bac_Flav_CT_G Location: 2406593-2407403 bp Feature: gene Location: 2407424-2407738 bp Ori: BBL15358.1 Feature: domain Description: DUF4133 Location: 2407442-2407706 bp Feature: domain Description: DUF41 33 Location: 2407442-2407706 bp Feature: gene Location: 2869788-2870816 bp Feature: gene Location: 2870813-2871301 bp Feature: gene Location: 2872170-2873444 bp Ori: BBL15726.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2872374-2873010 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2872374-287301 0 bp Feature: gene Location: 2873428-2874087 bp Feature: gene Location: 2874123-2874770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZIP_Gal4-like_1 (cd14724), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), DUF4133 (pfam13571), DUF3876 (pfam12992), Imm17 (pfam15562)
TraG-D_C (pfam12696), YWFCY (pfam14293), Relaxase (pfam03432), RVT-UG27