myRT

myRT report for GCA_006547025.1_ASM654702v1

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Seq: CP041236.1 Pseudomonas azotoformans strain P45A chromosome, complete genome (6884339 bp)
Overview 1 RT 1: 4766917-4781403 bp Neighborhood of RT #1 [4766917, 4781403] SbcC SbcC RVT-Retrons InsE TnpB_IS66 HTH_XRE MLTR_LBD RVT-Retrons Feature: gene Location: 4766917-4770813 bp Ori: QDH66611.1 Feature: domain Description: SbcC Location: 4767286-4767613 bp Feature: domain Description: SbcC Location: 4767286-476761 3 bp Feature: domain Description: SbcC Location: 4769299-4769452 bp Feature: domain Description: SbcC Location: 4769299-4769452 bp Feature: gene Location: 4771307-4772563 bp Feature: gene Location: 4772726-4773247 bp Ori: QDH66613.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4772990-4773239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4772990-4773239 bp Feature: gene Location: 4773344-4773661 bp Ori: QDH66614.1 Feature: domain Description: InsE Location: 4773350-4773545 bp Feature: domain Description: InsE Location: 4773350-4773545 bp Feature: gene Location: 4773782-4773970 bp Ori: QDH66615.1 Feature: domain Description: TnpB_IS66 Location: 4773785-4773941 bp Feature: domain Description: TnpB_IS66 Location: 4773785-4773941 bp Feature: gene Location: 4775656-4776015 bp Feature: gene Location: 4776083-4776940 bp Ori: QDH66618.1 Feature: domain Description: HTH_XRE Location: 4776185-4776347 bp Feature: domain Description: HTH_XRE Location: 47761 85-4776347 bp Feature: domain Description: MLTR_LBD Location: 4776431-4776914 bp Feature: domain Description: MLTR_LBD Location: 4776431 -477691 4 bp Feature: gene Location: 4776972-4777631 bp Ori: QDH66619.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4777002-4777359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4777002-4777359 bp Feature: gene Location: 4777908-4779857 bp Feature: gene Location: 4780552-4781403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcC (COG0419), RVT-Retrons, InsE (COG2963), TnpB_IS66 (pfam05717), HTH_XRE (smart00530), MLTR_LBD (pfam17765)