myRT

myRT report for GCA_006575625.1_ASM657562v1

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Seq: CP041257.1 Enterococcus faecium strain 515 chromosome, complete genome (2766162 bp)
Overview 1 RT 1: 1879471-1883724 bp 2 RT 2: 1892247-1906133 bp Neighborhood of RT #1 [1879471, 1883849] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Neighborhood of RT #2 [1892247, 1906133] RVT-GII HNHc AAA_10 COG3464 Lysozyme_like Spr RVT-GII HNHc TpcC Feature: gene Location: 1879471-1879815 bp Feature: domain Description: RelB_DinJ Location: 1879681-1879807 bp Feature: domain Description: RelB_DinJ Location: 1 879681 -1 879807 bp Feature: gene Location: 1879884-1880900 bp Feature: domain Description: FtsK_SpoIIIE Location: 1880541-1880781 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 880541 -1 880781 bp Feature: gene Location: 1881494-1882756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1881860-1882556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 881 860-1 882556 bp Feature: gene Location: 1882768-1883367 bp Feature: domain Description: HNHc Note: nucleases Location: 1883089-1883254 bp Feature: domain Description: HNHc Note: nucleases Location: 1 883089-1 883254 bp Feature: gene Location: 1883469-1883849 bp Feature: domain Description: FtsK Location: 1883484-1883724 bp Feature: domain Description: FtsK Location: 1 883484-1 883724 bp Feature: gene Location: 1892247-1893506 bp Feature: gene Location: 1893509-1893658 bp Feature: gene Location: 1894184-1895986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1894481-1895180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 894481 -1 8951 80 bp Feature: domain Description: HNHc Note: nucleases Location: 1895735-1895873 bp Feature: domain Description: HNHc Note: nucleases Location: 1 895735-1 895873 bp Feature: gene Location: 1896026-1896916 bp Feature: domain Description: AAA_10 Location: 1896188-1896908 bp Feature: domain Description: AAA_1 0 Location: 1 8961 88-1 896908 bp Feature: gene Location: 1897032-1898333 bp Feature: domain Description: COG3464 Location: 1897044-1898295 bp Feature: domain Description: COG3464 Location: 1 897044-1 898295 bp Feature: gene Location: 1898812-1900920 bp Feature: gene Location: 1900917-1901867 bp Feature: domain Description: Lysozyme_like Location: 1901064-1901526 bp Feature: domain Description: Lysozyme_like Location: 1 901 064-1 901 526 bp Feature: domain Description: Spr Location: 1901553-1901850 bp Feature: domain Description: Spr Location: 1 901 553-1 901 850 bp Feature: gene Location: 1902581-1904410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1902896-1903595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 902896-1 903595 bp Feature: domain Description: HNHc Note: nucleases Location: 1904120-1904285 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9041 20-1 904285 bp Feature: gene Location: 1904587-1905498 bp Feature: domain Description: TpcC Location: 1904818-1905484 bp Feature: domain Description: TpcC Location: 1 90481 8-1 905484 bp Feature: gene Location: 1905930-1906133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), AAA_10 (pfam12846), COG3464 (Transposase ), Lysozyme_like (pfam13702), Spr (COG0791), TpcC (pfam12642)

Seq: CP041258.1 Enterococcus faecium strain 515 plasmid p27, complete sequence (81972 bp)
Overview 1 RT 1: 56937-65937 bp Neighborhood of RT #1 [56937, 65937] TraG-D_C RVT-GII HNH_4 TraG_VirD4 TraG_VirD4 Feature: gene Location: 56937-58526 bp Feature: gene Location: 58523-59314 bp Feature: domain Description: TraG-D_C Location: 58526-58832 bp Feature: domain Description: TraG-D_C Location: 5852 6-58832 bp Feature: gene Location: 59440-61356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59779-60514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59779-60514 bp Feature: domain Description: HNH_4 Location: 61108-61213 bp Feature: domain Description: HNH_4 Location: 61108-612 13 bp Feature: gene Location: 62051-63883 bp Feature: domain Description: TraG_VirD4 Location: 62630-63308 bp Feature: domain Description: TraG_VirD4 Location: 62 630-63308 bp Feature: domain Description: TraG_VirD4 Location: 63695-63860 bp Feature: domain Description: TraG_VirD4 Location: 63695-63860 bp Feature: gene Location: 63883-65937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, HNH_4 (pfam13395), TraG_VirD4