myRT

myRT report for GCA_006716385.1_ASM671638v1

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Seq: CP033687.1 Bacillus coagulans strain DSM 2314 chromosome, complete genome (3628651 bp)
Overview 1 RT 1: 121955-129807 bp 2 RT 2: 1430422-1436158 bp 3 RT 3: 1771045-1775968 bp 4 RT 4: 2299603-2305138 bp 5 RT 5: 2317092-2326936 bp 6 RT 6: 2986775-2992743 bp Neighborhood of RT #1 [121955, 129833] AcrB RVT-GII GIIM EAL Neighborhood of RT #2 [1430422, 1436223] PhdYeFM_antitox DUF820 RVT-GII GIIM HMG-CoA-S_prok UPF0236 Neighborhood of RT #3 [1771045, 1776920] Lipase_GDSL_2 yflN-like_MBL-fold RVT-GII GIIM PnbA Neighborhood of RT #4 [2299603, 2305158] PRK03584 RVT-GII GIIM ChrA ChrA Neighborhood of RT #5 [2317092, 2326950] T7_esaA_Nterm YhgE RVT-GII GIIM MFS_SLC45_SUC PRK13807 Neighborhood of RT #6 [2986775, 2992757] nth DnaD RVT-GII GIIM asnC PRK05764 Feature: gene Location: 121955-122110 bp Feature: gene Location: 122485-125688 bp Ori: QDI60191.1 Feature: domain Description: AcrB Location: 122497-125647 bp Feature: domain Description: AcrB Location: 1 22497-1 25647 bp Feature: gene Location: 125764-127173 bp Ori: QDI60192.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126112-126727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 261 1 2-1 26727 bp Feature: domain Description: GIIM Note: maturase Location: 126781-127000 bp Feature: domain Description: GIIM Note: maturase Location: 1 26781 -1 27000 bp Feature: gene Location: 128503-128805 bp Feature: gene Location: 128802-129833 bp Ori: QDI60194.1 Feature: domain Description: EAL Location: 129108-129807 bp Feature: domain Description: EAL Location: 1 291 08-1 29807 bp Feature: gene Location: 1430422-1431147 bp Ori: QDI61262.1 Feature: domain Description: PhdYeFM_antitox Location: 1430431-1430542 bp Feature: domain Description: PhdYeFM_antitox Location: 1 430431 -1 430542 bp Feature: domain Description: DUF820 Location: 1430653-1431091 bp Feature: domain Description: DUF820 Location: 1 430653-1 431 091 bp Feature: gene Location: 1431666-1431851 bp Feature: gene Location: 1432003-1433412 bp Ori: QDI61264.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1432354-1432966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 432354-1 432966 bp Feature: domain Description: GIIM Note: maturase Location: 1433020-1433239 bp Feature: domain Description: GIIM Note: maturase Location: 1 433020-1 433239 bp Feature: gene Location: 1433480-1434664 bp Ori: QDI61265.1 Feature: domain Description: HMG-CoA-S_prok Location: 1433489-1434635 bp Feature: domain Description: HMG-CoA-S_prok Location: 1 433489-1 434635 bp Feature: gene Location: 1434808-1436223 bp Ori: QDI61266.1 Feature: domain Description: UPF0236 Location: 1434820-1436158 bp Feature: domain Description: UPF0236 Location: 1 434820-1 4361 58 bp Feature: gene Location: 1771045-1771860 bp Ori: QDI61544.1 Feature: domain Description: Lipase_GDSL_2 Location: 1771285-1771738 bp Feature: domain Description: Lipase_GDSL_2 Location: 1 771 285-1 771 738 bp Feature: gene Location: 1772484-1773200 bp Ori: QDI61545.1 Feature: domain Description: yflN-like_MBL-fold Location: 1772508-1773150 bp Feature: domain Description: yflN-like_MBL-fold Location: 1 772508-1 7731 50 bp Feature: gene Location: 1773641-1775050 bp Ori: QDI61546.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773989-1774604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 773989-1 774604 bp Feature: domain Description: GIIM Note: maturase Location: 1774658-1774877 bp Feature: domain Description: GIIM Note: maturase Location: 1 774658-1 774877 bp Feature: gene Location: 1775118-1775357 bp Feature: gene Location: 1775443-1776920 bp Feature: domain Description: PnbA Location: 1775455-1775968 bp Feature: domain Description: PnbA Location: 1 775455-1 775968 bp Feature: gene Location: 2299603-2299797 bp Feature: gene Location: 2300071-2302062 bp Ori: QDI61997.1 Feature: domain Description: PRK03584 Location: 2300095-2302033 bp Feature: domain Description: PRK03584 Location: 2300095-2302033 bp Feature: gene Location: 2302506-2303915 bp Ori: QDI61998.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302854-2303469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302854-2303469 bp Feature: domain Description: GIIM Note: maturase Location: 2303523-2303745 bp Feature: domain Description: GIIM Note: maturase Location: 2303523-2303745 bp Feature: gene Location: 2304023-2304562 bp Ori: QDI61999.1 Feature: domain Description: ChrA Location: 2304029-2304545 bp Feature: domain Description: ChrA Location: 2304029-2304545 bp Feature: gene Location: 2304559-2305158 bp Ori: QDI62000.1 Feature: domain Description: ChrA Location: 2304574-2305138 bp Feature: domain Description: ChrA Location: 2304574-23051 38 bp Feature: gene Location: 2317092-2320493 bp Gene: esaA Feature: domain Description: T7_esaA_Nterm Location: 2317122-2317695 bp Feature: domain Description: T7_esaA_Nterm Location: 231 71 22-231 7695 bp Feature: domain Description: YhgE Location: 2319381-2320383 bp Feature: domain Description: YhgE Location: 231 9381 -2320383 bp Feature: gene Location: 2320496-2320789 bp Feature: gene Location: 2321234-2322643 bp Ori: QDI62011.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321582-2322197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321 582-23221 97 bp Feature: domain Description: GIIM Note: maturase Location: 2322251-2322470 bp Feature: domain Description: GIIM Note: maturase Location: 2322251 -2322470 bp Feature: gene Location: 2323242-2324648 bp Ori: QDI62012.1 Feature: domain Description: MFS_SLC45_SUC Location: 2323362-2324604 bp Feature: domain Description: MFS_SLC45_SUC Location: 2323362-2324604 bp Feature: gene Location: 2324674-2326950 bp Ori: QDI62013.1 Feature: domain Description: PRK13807 Location: 2324677-2326936 bp Feature: domain Description: PRK1 3807 Location: 2324677-2326936 bp Feature: gene Location: 2986775-2987434 bp Ori: QDI62634.1 Gene: nth Feature: domain Description: nth Location: 2986790-2987363 bp Feature: domain Description: nth Location: 2986790-2987363 bp Feature: gene Location: 2987482-2988177 bp Ori: QDI62635.1 Feature: domain Description: DnaD Location: 2987491-2988175 bp Feature: domain Description: DnaD Location: 2987491 -29881 75 bp Feature: gene Location: 2988687-2990096 bp Ori: QDI62636.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989035-2989650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989035-2989650 bp Feature: domain Description: GIIM Note: maturase Location: 2989704-2989923 bp Feature: domain Description: GIIM Note: maturase Location: 2989704-2989923 bp Feature: gene Location: 2990182-2991474 bp Ori: QDI63364.1 Feature: domain Description: asnC Location: 2990197-2991469 bp Feature: domain Description: asnC Location: 29901 97-2991 469 bp Feature: gene Location: 2991570-2992757 bp Ori: QDI62637.1 Feature: domain Description: PRK05764 Location: 2991573-2992743 bp Feature: domain Description: PRK05764 Location: 2991 573-2992743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrB (COG0841), RVT-GII, GIIM (pfam08388), EAL (smart00052), PhdYeFM_antitox (pfam02604), DUF820, HMG-CoA-S_prok (TIGR01835), UPF0236 (pfam06782), Lipase_GDSL_2 (pfam13472), yflN-like_MBL-fold (cd07721)
PnbA (COG2272), PRK03584 (acetoacetate--CoA ligase), ChrA (COG2059), T7_esaA_Nterm (TIGR03929), YhgE (COG1511), MFS_SLC45_SUC (cd17313), PRK13807 (maltose phosphorylase; Provisional), nth (TIGR01083), DnaD (COG3935), asnC (PRK03932)
PRK05764 (aspartate aminotransferase; Provisional)