myRT

myRT report for GCA_006739545.1_ASM673954v1

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Seq: AP019729.1 Parabacteroides distasonis NBRC 113806 DNA, complete genome (5179960 bp)
Overview 1 RT 1: 719241-727021 bp 2 RT 2: 1075234-1081257 bp 3 RT 3: 2170368-2181672 bp 4 RT 4: 4602046-4608274 bp Neighborhood of RT #1 [719241, 727104] DDE_Tnp_1_assoc YhhI YhhI RVT_N RVT-GII GIIM Spc7 PRK13351 Neighborhood of RT #2 [1075234, 1082459] DDE_Tnp_1_assoc YhhI YhhI RVT_N RVT-GII GIIM KAP_NTPase Neighborhood of RT #3 [2170368, 2181674] PRK13351 Spc7 RVT_N RVT-GII GIIM N6_Mtase COG4646 DUF1896 Neighborhood of RT #4 [4602046, 4608291] NVEALA DUF1573 RVT_N RVT-GII GIIM TolB_like CadC1 Feature: gene Location: 719241-720371 bp Ori: BBK90287.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 719262-719520 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 71 9262-71 9520 bp Feature: domain Description: YhhI Location: 719682-719868 bp Feature: domain Description: YhhI Location: 71 9682-71 9868 bp Feature: domain Description: YhhI Location: 720054-720276 bp Feature: domain Description: YhhI Location: 720054-720276 bp Feature: gene Location: 720483-720929 bp Feature: gene Location: 721588-723255 bp Ori: BBK90289.1 Feature: domain Description: RVT_N Location: 721642-721885 bp Feature: domain Description: RVT_N Location: 721 642-721 885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721930-722578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721 930-722578 bp Feature: domain Description: GIIM Note: maturase Location: 722632-722863 bp Feature: domain Description: GIIM Note: maturase Location: 722632-722863 bp Feature: gene Location: 723257-724522 bp Ori: BBK90290.1 Feature: domain Description: Spc7 Location: 724133-724400 bp Feature: domain Description: Spc7 Location: 7241 33-724400 bp Feature: gene Location: 725131-727104 bp Ori: BBK90291.1 Gene: tetQ_1 Feature: domain Description: PRK13351 Location: 725179-727021 bp Feature: domain Description: PRK1 3351 Location: 7251 79-727021 bp Feature: gene Location: 1075234-1076364 bp Ori: BBK90602.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 1075255-1075513 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 1 075255-1 07551 3 bp Feature: domain Description: YhhI Location: 1075675-1075861 bp Feature: domain Description: YhhI Location: 1 075675-1 075861 bp Feature: domain Description: YhhI Location: 1076047-1076269 bp Feature: domain Description: YhhI Location: 1 076047-1 076269 bp Feature: gene Location: 1076476-1076922 bp Feature: gene Location: 1077581-1079248 bp Ori: BBK90604.1 Feature: domain Description: RVT_N Location: 1077635-1077878 bp Feature: domain Description: RVT_N Location: 1 077635-1 077878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1077923-1078571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 077923-1 078571 bp Feature: domain Description: GIIM Note: maturase Location: 1078625-1078856 bp Feature: domain Description: GIIM Note: maturase Location: 1 078625-1 078856 bp Feature: gene Location: 1079250-1080329 bp Feature: gene Location: 1080570-1082459 bp Ori: BBK90606.1 Feature: domain Description: KAP_NTPase Location: 1080618-1081257 bp Feature: domain Description: KAP_NTPase Location: 1 08061 8-1 081 257 bp Feature: gene Location: 2170368-2172293 bp Ori: BBK91544.1 Gene: tetQ_2 Feature: domain Description: PRK13351 Location: 2170371-2172225 bp Feature: domain Description: PRK1 3351 Location: 21 70371 -21 72225 bp Feature: gene Location: 2172951-2174216 bp Ori: BBK91545.1 Feature: domain Description: Spc7 Location: 2173827-2174094 bp Feature: domain Description: Spc7 Location: 21 73827-21 74094 bp Feature: gene Location: 2174218-2175885 bp Ori: BBK91546.1 Feature: domain Description: RVT_N Location: 2174272-2174515 bp Feature: domain Description: RVT_N Location: 21 74272-21 7451 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2174560-2175208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 74560-21 75208 bp Feature: domain Description: GIIM Note: maturase Location: 2175262-2175493 bp Feature: domain Description: GIIM Note: maturase Location: 21 75262-21 75493 bp Feature: gene Location: 2176544-2181232 bp Ori: BBK91547.1 Feature: domain Description: N6_Mtase Location: 2176856-2177459 bp Feature: domain Description: N6_Mtase Location: 21 76856-21 77459 bp Feature: domain Description: COG4646 Location: 2178788-2180849 bp Feature: domain Description: COG4646 Location: 21 78788-21 80849 bp Feature: gene Location: 2181222-2181674 bp Ori: BBK91548.1 Feature: domain Description: DUF1896 Location: 2181252-2181672 bp Feature: domain Description: DUF1 896 Location: 21 81 252-21 81 672 bp Feature: gene Location: 4602046-4602276 bp Ori: BBK93429.1 Feature: domain Description: NVEALA Location: 4602055-4602211 bp Feature: domain Description: NVEALA Location: 4602055-460221 1 bp Feature: gene Location: 4602483-4603151 bp Ori: BBK93430.1 Feature: domain Description: DUF1573 Location: 4602864-4603143 bp Feature: domain Description: DUF1 573 Location: 4602864-46031 43 bp Feature: gene Location: 4603812-4605479 bp Ori: BBK93431.1 Feature: domain Description: RVT_N Location: 4603866-4604109 bp Feature: domain Description: RVT_N Location: 4603866-46041 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4604154-4604802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46041 54-4604802 bp Feature: domain Description: GIIM Note: maturase Location: 4604856-4605087 bp Feature: domain Description: GIIM Note: maturase Location: 4604856-4605087 bp Feature: gene Location: 4605815-4606864 bp Ori: BBK93432.1 Feature: domain Description: TolB_like Location: 4605905-4606802 bp Feature: domain Description: TolB_like Location: 4605905-4606802 bp Feature: gene Location: 4607284-4608291 bp Ori: BBK93433.1 Feature: domain Description: CadC1 Location: 4608007-4608274 bp Feature: domain Description: CadC1 Location: 4608007-4608274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Spc7 (smart00787), PRK13351 (elongation factor G-like protein), KAP_NTPase (pfam07693), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )
DUF1896 (pfam08989), NVEALA (pfam14055), DUF1573 (pfam07610), TolB_like (pfam15869), CadC1 (COG3710)