myRT

myRT report for GCA_006970665.1_ASM697066v1

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Seq: CP033894.1 Serratia liquefaciens strain FG3 plasmid p1-159, complete sequence (159042 bp)
Overview 1 RT 1: 84209-89552 bp 2 RT 2: 145387-156690 bp Neighborhood of RT #1 [84209, 89809] PRK15219 RVT-UG4 COG3464 COG4584 DDE_Tnp_ISL3 Zn_Tnp_IS91 Y2_Tnp Neighborhood of RT #2 [145387, 156692] HTH_7 Zn_Tnp_IS91 RVT-GII COG3464 COG4584 DDE_Tnp_ISL3 RVT-UG4 FimD Feature: gene Location: 84209-84648 bp Feature: gene Location: 85333-86073 bp Ori: QDL35676.1 Feature: domain Description: PRK15219 Location: 85336-86068 bp Feature: domain Description: PRK1 521 9 Location: 85336-86068 bp Feature: gene Location: 86161-86721 bp Ori: QDL35677.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 86164-86536 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 861 64-86536 bp Feature: gene Location: 86792-88411 bp Ori: QDL35678.1 Feature: domain Description: COG3464 Location: 86867-87656 bp Feature: domain Description: COG3464 Location: 86867-87656 bp Feature: domain Description: COG4584 Location: 87686-87953 bp Feature: domain Description: COG4584 Location: 87686-87953 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 88034-88391 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 88034-88391 bp Feature: gene Location: 88586-89809 bp Ori: QDL35679.1 Feature: domain Description: Zn_Tnp_IS91 Location: 88631-88901 bp Feature: domain Description: Zn_Tnp_IS91 Location: 88631 -88901 bp Feature: domain Description: Y2_Tnp Location: 89015-89552 bp Feature: domain Description: Y2_Tnp Location: 8901 5-89552 bp Feature: gene Location: 145387-145461 bp Feature: domain Description: HTH_7 Location: 145399-145459 bp Feature: domain Description: HTH_7 Location: 1 45399-1 45459 bp Feature: gene Location: 145604-146828 bp Feature: domain Description: Zn_Tnp_IS91 Location: 145649-145919 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1 45649-1 4591 9 bp Feature: gene Location: 147050-147664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147056-147659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 47056-1 47659 bp Feature: gene Location: 147716-149335 bp Ori: QDL35720.1 Feature: domain Description: COG3464 Location: 147791-148580 bp Feature: domain Description: COG3464 Location: 1 47791 -1 48580 bp Feature: domain Description: COG4584 Location: 148610-148877 bp Feature: domain Description: COG4584 Location: 1 4861 0-1 48877 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 148958-149315 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 48958-1 4931 5 bp Feature: gene Location: 149434-149724 bp Feature: gene Location: 151257-151512 bp Feature: gene Location: 151924-152619 bp Feature: gene Location: 152697-153701 bp Ori: QDL35724.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 153057-153507 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 53057-1 53507 bp Feature: gene Location: 153718-154194 bp Feature: gene Location: 154248-156692 bp Feature: domain Description: FimD Location: 154251-156690 bp Feature: domain Description: FimD Location: 1 54251 -1 56690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15219 (carbonic anhydrase; Provisional), RVT-UG4, COG3464 (Transposase ), COG4584 (Transposase ), DDE_Tnp_ISL3 (pfam01610), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), HTH_7 (pfam02796), RVT-GII, FimD (COG3188)

Seq: CP033893.1 Serratia liquefaciens strain FG3 chromosome, complete genome (5706987 bp)
Overview 1 RT 1: 2980309-2984204 bp Neighborhood of RT #1 [2980309, 2984252] Q RVT-Retrons HTH_Tnp_1 Feature: gene Location: 2980309-2981159 bp Feature: gene Location: 2981487-2981693 bp Feature: domain Description: Q Location: 2981502-2981691 bp Feature: domain Description: Q Location: 2 981502 -2 981691 bp Feature: gene Location: 2981710-2982669 bp Ori: QDL32970.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2981875-2982424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 981875-2 982 42 4 bp Feature: gene Location: 2982832-2983755 bp Feature: gene Location: 2983994-2984252 bp Ori: QDL32972.1 Feature: domain Description: HTH_Tnp_1 Location: 2984000-2984204 bp Feature: domain Description: HTH_Tnp_1 Location: 2 984000-2 9842 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, HTH_Tnp_1 (pfam01527)