myRT

myRT report for GCA_006974005.1_ASM697400v1

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Seq: CP029823.1 Streptomyces malaysiensis strain DSM 4137 chromosome, complete genome (10670746 bp)
Overview 1 RT 1: 2753960-2759951 bp 2 RT 2: 4050571-4056378 bp 3 RT 3: 6288066-6294591 bp 4 RT 4: 6973268-6978233 bp 5 RT 5: 7702797-7707978 bp Neighborhood of RT #1 [2753960, 2759951] zf-TFIIB APH RVT_N RVT-GII couple_hipB Neighborhood of RT #2 [4050571, 4056440] M4_TLP InsQ RVT_N RVT-GII GIIM HNH PBP2_phosphate_like_1 Neighborhood of RT #3 [6288066, 6294668] MhpC Abhydrolase_4 RVT_N RVT-GII GIIM COG2442 Beta-lactamase Neighborhood of RT #4 [6973268, 6978233] NHL_PKND_like RVT-GII GIIM Neighborhood of RT #5 [7702797, 7707989] InsQ RVT_N RVT-GII MhpC Feature: gene Location: 2753960-2754241 bp Ori: QDL69773.1 Feature: domain Description: zf-TFIIB Location: 2753966-2754080 bp Feature: domain Description: zf-TFIIB Location: 2753966-2754080 bp Feature: gene Location: 2754305-2755096 bp Ori: QDL75298.1 Feature: domain Description: APH Location: 2754350-2754914 bp Feature: domain Description: APH Location: 2754350-275491 4 bp Feature: gene Location: 2756302-2758009 bp Gene: ltrA Feature: domain Description: RVT_N Location: 2756338-2756581 bp Feature: domain Description: RVT_N Location: 2756338-2756581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2756632-2757067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2756632-2757067 bp Feature: gene Location: 2758102-2759295 bp Ori: QDL75299.1 Feature: domain Description: couple_hipB Location: 2758117-2758279 bp Feature: domain Description: couple_hipB Location: 27581 1 7-2758279 bp Feature: gene Location: 2759472-2759951 bp Feature: gene Location: 4050571-4050792 bp Ori: QDL70656.1 Feature: domain Description: M4_TLP Location: 4050670-4050763 bp Feature: domain Description: M4_TLP Location: 4050670-4050763 bp Feature: gene Location: 4050837-4051511 bp Feature: domain Description: InsQ Location: 4050870-4051455 bp Feature: domain Description: InsQ Location: 4050870-4051 455 bp Feature: gene Location: 4051578-4053365 bp Ori: QDL70657.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4051647-4051890 bp Feature: domain Description: RVT_N Location: 4051 647-4051 890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4051941-4052598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4051 941 -4052598 bp Feature: domain Description: GIIM Note: maturase Location: 4052658-4052886 bp Feature: domain Description: GIIM Note: maturase Location: 4052658-4052886 bp Feature: domain Description: HNH Note: nucleases Location: 4053213-4053312 bp Feature: domain Description: HNH Note: nucleases Location: 405321 3-405331 2 bp Feature: gene Location: 4053999-4054547 bp Feature: gene Location: 4054887-4056440 bp Ori: QDL70658.1 Feature: domain Description: PBP2_phosphate_like_1 Location: 4055586-4056378 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 4055586-4056378 bp Feature: gene Location: 6288066-6289700 bp Ori: QDL72262.1 Feature: domain Description: MhpC Location: 6288270-6289065 bp Feature: domain Description: MhpC Location: 6288270-6289065 bp Feature: domain Description: Abhydrolase_4 Location: 6289320-6289614 bp Feature: domain Description: Abhydrolase_4 Location: 6289320-628961 4 bp Feature: gene Location: 6289924-6290229 bp Feature: gene Location: 6290949-6292657 bp Gene: ltrA Feature: domain Description: RVT_N Location: 6290985-6291228 bp Feature: domain Description: RVT_N Location: 6290985-6291 228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6291279-6291927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6291 279-6291 927 bp Feature: domain Description: GIIM Note: maturase Location: 6291978-6292212 bp Feature: domain Description: GIIM Note: maturase Location: 6291 978-629221 2 bp Feature: gene Location: 6292722-6293177 bp Ori: QDL72264.1 Feature: domain Description: COG2442 Location: 6292794-6292971 bp Feature: domain Description: COG2442 Location: 6292794-6292971 bp Feature: gene Location: 6293421-6294668 bp Ori: QDL72265.1 Feature: domain Description: Beta-lactamase Location: 6293703-6294591 bp Feature: domain Description: Beta-lactamase Location: 6293703-6294591 bp Feature: gene Location: 6973268-6974236 bp Ori: QDL72743.1 Feature: domain Description: NHL_PKND_like Location: 6973568-6974171 bp Feature: domain Description: NHL_PKND_like Location: 6973568-69741 71 bp Feature: gene Location: 6974469-6975065 bp Feature: gene Location: 6975916-6977388 bp Ori: QDL72745.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6976255-6976951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6976255-6976951 bp Feature: domain Description: GIIM Note: maturase Location: 6977026-6977245 bp Feature: domain Description: GIIM Note: maturase Location: 6977026-6977245 bp Feature: gene Location: 6977489-6977734 bp Feature: gene Location: 6977706-6978233 bp Feature: gene Location: 7702797-7703029 bp Feature: gene Location: 7703064-7703738 bp Feature: domain Description: InsQ Location: 7703085-7703679 bp Feature: domain Description: InsQ Location: 7703085-7703679 bp Feature: gene Location: 7703805-7705590 bp Gene: ltrA Feature: domain Description: RVT_N Location: 7703874-7704117 bp Feature: domain Description: RVT_N Location: 7703874-77041 1 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7704168-7704279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77041 68-7704279 bp Feature: gene Location: 7706224-7706772 bp Feature: gene Location: 7707207-7707989 bp Ori: QDL73167.1 Feature: domain Description: MhpC Location: 7707228-7707978 bp Feature: domain Description: MhpC Location: 7707228-7707978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-TFIIB (pfam13453), APH (pfam01636), RVT_N (pfam13655), RVT-GII, couple_hipB (TIGR03070), M4_TLP (cd09597), InsQ (COG0675), GIIM (pfam08388), HNH (pfam01844), PBP2_phosphate_like_1 (cd13653)
MhpC (COG0596), Abhydrolase_4 (pfam08386), COG2442 (Uncharacterized conserved protein, DUF433 family ), Beta-lactamase (pfam00144), NHL_PKND_like (cd14952)