myRT

myRT report for GCA_006974205.1_ASM697420v1

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Seq: CP041233.1 Serratia marcescens subsp. marcescens ATCC 13880 chromosome, complete genome (5115562 bp)
Overview 1 RT 1: 88845-90755 bp 2 RT 2: 644136-652947 bp 3 RT 3: 958372-969650 bp Neighborhood of RT #1 [88845, 90937] PRK15287 FimA RVT-UG4 Neighborhood of RT #2 [644136, 653042] Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 RVT-DGRs RVT-DGRs CaiF_GrlA PerC Neighborhood of RT #3 [958372, 969661] PRK15318 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 RVT-DGRs RVT-DGRs CaiF_GrlA PerC Feature: gene Location: 88845-89345 bp Ori: QDL84033.1 Feature: domain Description: PRK15287 Location: 88899-89340 bp Feature: domain Description: PRK1 5287 Location: 88899-89340 bp Feature: gene Location: 89356-89933 bp Feature: domain Description: FimA Location: 89419-89734 bp Feature: domain Description: FimA Location: 8941 9-89734 bp Feature: gene Location: 89951-90937 bp Ori: QDL84034.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 90308-90755 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 90308-90755 bp Feature: gene Location: 644136-649175 bp Ori: QDL84474.1 Feature: domain Description: Invasin_D3 Location: 644142-644394 bp Feature: domain Description: Invasin_D3 Location: 6441 42-644394 bp Feature: domain Description: Invasin_D3 Location: 644415-644724 bp Feature: domain Description: Invasin_D3 Location: 64441 5-644724 bp Feature: domain Description: Invasin_D3 Location: 644748-645057 bp Feature: domain Description: Invasin_D3 Location: 644748-645057 bp Feature: domain Description: Invasin_D3 Location: 645081-645390 bp Feature: domain Description: Invasin_D3 Location: 645081 -645390 bp Feature: domain Description: Invasin_D3 Location: 645414-645723 bp Feature: domain Description: Invasin_D3 Location: 64541 4-645723 bp Feature: domain Description: Invasin_D3 Location: 645747-646056 bp Feature: domain Description: Invasin_D3 Location: 645747-646056 bp Feature: domain Description: Invasin_D3 Location: 646080-646389 bp Feature: domain Description: Invasin_D3 Location: 646080-646389 bp Feature: domain Description: Invasin_D3 Location: 646413-646722 bp Feature: domain Description: Invasin_D3 Location: 64641 3-646722 bp Feature: domain Description: Invasin_D3 Location: 646746-647055 bp Feature: domain Description: Invasin_D3 Location: 646746-647055 bp Feature: domain Description: Invasin_D3 Location: 647079-647388 bp Feature: domain Description: Invasin_D3 Location: 647079-647388 bp Feature: domain Description: Invasin_D3 Location: 647412-647721 bp Feature: domain Description: Invasin_D3 Location: 64741 2-647721 bp Feature: domain Description: Invasin_D3 Location: 647745-648054 bp Feature: domain Description: Invasin_D3 Location: 647745-648054 bp Feature: domain Description: Invasin_D3 Location: 648078-648387 bp Feature: domain Description: Invasin_D3 Location: 648078-648387 bp Feature: domain Description: Invasin_D3 Location: 648405-648681 bp Feature: domain Description: Invasin_D3 Location: 648405-648681 bp Feature: gene Location: 649387-649860 bp Feature: gene Location: 650580-650843 bp Ori: QDL84476.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 650583-650799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 650583-650799 bp Feature: gene Location: 651089-651499 bp Ori: QDL84477.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 651281-651497 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 651 281 -651 497 bp Feature: gene Location: 652057-652560 bp Ori: QDL84478.1 Feature: domain Description: CaiF_GrlA Location: 652132-652399 bp Feature: domain Description: CaiF_GrlA Location: 6521 32-652399 bp Feature: gene Location: 652680-653042 bp Ori: QDL84479.1 Feature: domain Description: PerC Location: 652797-652947 bp Feature: domain Description: PerC Location: 652797-652947 bp Feature: gene Location: 958372-966018 bp Ori: QDL84723.1 Feature: domain Description: PRK15318 Location: 958375-958846 bp Feature: domain Description: PRK1 531 8 Location: 958375-958846 bp Feature: domain Description: Invasin_D3 Location: 959134-959422 bp Feature: domain Description: Invasin_D3 Location: 9591 34-959422 bp Feature: domain Description: Invasin_D3 Location: 959443-959752 bp Feature: domain Description: Invasin_D3 Location: 959443-959752 bp Feature: domain Description: Invasin_D3 Location: 959776-960085 bp Feature: domain Description: Invasin_D3 Location: 959776-960085 bp Feature: domain Description: Invasin_D3 Location: 960109-960418 bp Feature: domain Description: Invasin_D3 Location: 9601 09-96041 8 bp Feature: domain Description: Invasin_D3 Location: 960442-960751 bp Feature: domain Description: Invasin_D3 Location: 960442-960751 bp Feature: domain Description: Invasin_D3 Location: 960775-961084 bp Feature: domain Description: Invasin_D3 Location: 960775-961 084 bp Feature: domain Description: Invasin_D3 Location: 961108-961417 bp Feature: domain Description: Invasin_D3 Location: 961 1 08-961 41 7 bp Feature: domain Description: Invasin_D3 Location: 961441-961750 bp Feature: domain Description: Invasin_D3 Location: 961 441 -961 750 bp Feature: domain Description: Invasin_D3 Location: 961774-962083 bp Feature: domain Description: Invasin_D3 Location: 961 774-962083 bp Feature: domain Description: Invasin_D3 Location: 962107-962416 bp Feature: domain Description: Invasin_D3 Location: 9621 07-96241 6 bp Feature: domain Description: Invasin_D3 Location: 962440-962749 bp Feature: domain Description: Invasin_D3 Location: 962440-962749 bp Feature: domain Description: Invasin_D3 Location: 962773-963082 bp Feature: domain Description: Invasin_D3 Location: 962773-963082 bp Feature: domain Description: Invasin_D3 Location: 963106-963415 bp Feature: domain Description: Invasin_D3 Location: 9631 06-96341 5 bp Feature: domain Description: Invasin_D3 Location: 963439-963748 bp Feature: domain Description: Invasin_D3 Location: 963439-963748 bp Feature: domain Description: Invasin_D3 Location: 963772-964081 bp Feature: domain Description: Invasin_D3 Location: 963772-964081 bp Feature: domain Description: Invasin_D3 Location: 964105-964414 bp Feature: domain Description: Invasin_D3 Location: 9641 05-96441 4 bp Feature: domain Description: Invasin_D3 Location: 964438-964747 bp Feature: domain Description: Invasin_D3 Location: 964438-964747 bp Feature: domain Description: Invasin_D3 Location: 964771-965080 bp Feature: domain Description: Invasin_D3 Location: 964771 -965080 bp Feature: domain Description: Invasin_D3 Location: 965104-965407 bp Feature: domain Description: Invasin_D3 Location: 9651 04-965407 bp Feature: gene Location: 966103-966576 bp Feature: gene Location: 967210-967557 bp Ori: QDL84725.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 967213-967447 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96721 3-967447 bp Feature: gene Location: 967803-968213 bp Ori: QDL84726.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 967995-968211 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 967995-96821 1 bp Feature: gene Location: 968771-969274 bp Ori: QDL84727.1 Feature: domain Description: CaiF_GrlA Location: 968846-969113 bp Feature: domain Description: CaiF_GrlA Location: 968846-9691 1 3 bp Feature: gene Location: 969473-969661 bp Ori: QDL84728.1 Feature: domain Description: PerC Location: 969512-969650 bp Feature: domain Description: PerC Location: 96951 2-969650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4, Invasin_D3 (pfam09134), RVT-DGRs, CaiF_GrlA (pfam07180), PerC (pfam06069), PRK15318 (intimin-like protein SinH; Provisional)