myRT

myRT report for GCA_007106565.1_ASM710656v1

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Seq: CP041512.1 Shigella boydii strain KCCM 41690 plasmid unnamed, complete sequence (108375 bp)
Overview 1 RT 1: 83441-86768 bp Neighborhood of RT #1 [83441, 86782] PHA02517 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 83441-84088 bp Feature: domain Description: PHA02517 Location: 83444-84086 bp Feature: domain Description: PHA0251 7 Location: 83444-84086 bp Feature: gene Location: 84182-84313 bp Feature: domain Description: DDE_Tnp_IS66 Location: 84194-84287 bp Feature: domain Description: DDE_Tnp_IS66 Location: 841 94-84287 bp Feature: gene Location: 84875-86008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84977-85631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84977-85631 bp Feature: domain Description: GIIM Note: maturase Location: 85709-85931 bp Feature: domain Description: GIIM Note: maturase Location: 85709-85931 bp Feature: gene Location: 86124-86270 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 86136-86247 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 861 36-86247 bp Feature: gene Location: 86297-86782 bp Feature: domain Description: COG3547 Location: 86315-86768 bp Feature: domain Description: COG3547 Location: 8631 5-86768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )