myRT

myRT report for GCA_007113405.1_ASM711340v1

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Seq: CP041650.1 Streptomyces sp. RLB1-8 chromosome, complete genome (11765340 bp)
Overview 1 RT 1: 809408-814077 bp 2 RT 2: 1648076-1652658 bp 3 RT 3: 1888527-1896724 bp 4 RT 4: 9687121-9690700 bp Neighborhood of RT #1 [809408, 814088] MhpC RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #2 [1648076, 1652658] RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #3 [1888527, 1896768] SpoIIE RimI RVT-GII Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM DUF4259 UDG_F5_TTUDGB_like Neighborhood of RT #4 [9687121, 9690702] COG3293 COG3293 RVT-GII DUF772 Feature: gene Location: 809408-809883 bp Feature: domain Description: MhpC Location: 809582-809780 bp Feature: domain Description: MhpC Location: 809582-809780 bp Feature: gene Location: 809890-810016 bp Feature: gene Location: 810488-811963 bp Ori: QDO57462.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810830-811526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0830-81 1 526 bp Feature: domain Description: GIIM Note: maturase Location: 811601-811820 bp Feature: domain Description: GIIM Note: maturase Location: 81 1 601 -81 1 820 bp Feature: gene Location: 812146-812373 bp Feature: gene Location: 812559-814088 bp Ori: QDO65757.1 Feature: domain Description: COG3464 Location: 812565-813210 bp Feature: domain Description: COG3464 Location: 81 2565-81 321 0 bp Feature: domain Description: COG3464 Location: 813732-814077 bp Feature: domain Description: COG3464 Location: 81 3732-81 4077 bp Feature: gene Location: 1648076-1648411 bp Feature: gene Location: 1648520-1648646 bp Feature: gene Location: 1649118-1650593 bp Ori: QDO58088.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1649460-1650156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 649460-1 6501 56 bp Feature: domain Description: GIIM Note: maturase Location: 1650231-1650450 bp Feature: domain Description: GIIM Note: maturase Location: 1 650231 -1 650450 bp Feature: gene Location: 1650716-1652245 bp Ori: QDO65832.1 Feature: domain Description: COG3464 Location: 1650722-1651367 bp Feature: domain Description: COG3464 Location: 1 650722-1 651 367 bp Feature: domain Description: COG3464 Location: 1651889-1652234 bp Feature: domain Description: COG3464 Location: 1 651 889-1 652234 bp Feature: gene Location: 1652431-1652658 bp Feature: gene Location: 1888527-1889768 bp Ori: QDO58253.1 Feature: domain Description: SpoIIE Location: 1889160-1889730 bp Feature: domain Description: SpoIIE Location: 1 8891 60-1 889730 bp Feature: gene Location: 1890267-1890788 bp Ori: QDO58254.1 Feature: domain Description: RimI Location: 1890306-1890702 bp Feature: domain Description: RimI Location: 1 890306-1 890702 bp Feature: gene Location: 1891575-1892290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1891899-1892088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 891 899-1 892088 bp Feature: gene Location: 1892270-1893940 bp Feature: domain Description: Resolvase Location: 1892282-1892720 bp Feature: domain Description: Resolvase Location: 1 892282-1 892720 bp Feature: domain Description: Recombinase Location: 1892810-1893173 bp Feature: domain Description: Recombinase Location: 1 89281 0-1 8931 73 bp Feature: domain Description: Zn_ribbon_recom Location: 1893212-1893404 bp Feature: domain Description: Zn_ribbon_recom Location: 1 89321 2-1 893404 bp Feature: gene Location: 1894073-1894420 bp Ori: QDO58255.1 Feature: domain Description: COG3905 Location: 1894274-1894391 bp Feature: domain Description: COG3905 Location: 1 894274-1 894391 bp Feature: gene Location: 1894529-1895275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1894532-1894844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 894532-1 894844 bp Feature: domain Description: GIIM Note: maturase Location: 1894916-1895135 bp Feature: domain Description: GIIM Note: maturase Location: 1 89491 6-1 8951 35 bp Feature: gene Location: 1895405-1895837 bp Feature: domain Description: DUF4259 Location: 1895411-1895531 bp Feature: domain Description: DUF4259 Location: 1 89541 1 -1 895531 bp Feature: gene Location: 1895986-1896768 bp Ori: QDO58256.1 Feature: domain Description: UDG_F5_TTUDGB_like Location: 1896088-1896724 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 896088-1 896724 bp Feature: gene Location: 9687121-9687951 bp Feature: domain Description: COG3293 Location: 9687142-9687487 bp Feature: domain Description: COG3293 Location: 96871 42-9687487 bp Feature: domain Description: COG3293 Location: 9687538-9687910 bp Feature: domain Description: COG3293 Location: 9687538-968791 0 bp Feature: gene Location: 9687948-9688262 bp Feature: gene Location: 9688390-9689809 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9688711-9689395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 968871 1 -9689395 bp Feature: gene Location: 9689851-9690094 bp Feature: gene Location: 9690415-9690702 bp Feature: domain Description: DUF772 Location: 9690583-9690700 bp Feature: domain Description: DUF772 Location: 9690583-9690700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), COG3464 (Transposase ), SpoIIE (pfam07228), RimI (COG0456), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator )
DUF4259 (pfam14078), UDG_F5_TTUDGB_like, COG3293 (Transposase ), DUF772 (pfam05598)