myRT

myRT report for GCA_007113405.2_ASM711340v2

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Seq: CP041650.2 Streptomyces sp. RLB1-8 chromosome, complete genome (11765395 bp)
Overview 1 RT 1: 809463-814132 bp 2 RT 2: 1648131-1652713 bp 3 RT 3: 1888582-1896779 bp 4 RT 4: 9687176-9690755 bp Neighborhood of RT #1 [809463, 814143] MhpC RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #2 [1648131, 1652713] RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #3 [1888582, 1896823] SpoIIE RimI RVT-GII Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM DUF4259 UDG_F5_TTUDGB_like Neighborhood of RT #4 [9687176, 9690757] COG3293 COG3293 RVT-GII DUF772 Feature: gene Location: 809463-809938 bp Feature: domain Description: MhpC Location: 809637-809835 bp Feature: domain Description: MhpC Location: 809637-809835 bp Feature: gene Location: 809945-810071 bp Feature: gene Location: 810543-812018 bp Ori: QDO57462.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810885-811581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0885-81 1 581 bp Feature: domain Description: GIIM Note: maturase Location: 811656-811875 bp Feature: domain Description: GIIM Note: maturase Location: 81 1 656-81 1 875 bp Feature: gene Location: 812201-812428 bp Feature: gene Location: 812614-814143 bp Ori: QDO65757.1 Feature: domain Description: COG3464 Location: 812620-813265 bp Feature: domain Description: COG3464 Location: 81 2620-81 3265 bp Feature: domain Description: COG3464 Location: 813787-814132 bp Feature: domain Description: COG3464 Location: 81 3787-81 41 32 bp Feature: gene Location: 1648131-1648466 bp Feature: gene Location: 1648575-1648701 bp Feature: gene Location: 1649173-1650648 bp Ori: QDO58088.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1649515-1650211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 64951 5-1 65021 1 bp Feature: domain Description: GIIM Note: maturase Location: 1650286-1650505 bp Feature: domain Description: GIIM Note: maturase Location: 1 650286-1 650505 bp Feature: gene Location: 1650771-1652300 bp Ori: QDO65832.1 Feature: domain Description: COG3464 Location: 1650777-1651422 bp Feature: domain Description: COG3464 Location: 1 650777-1 651 422 bp Feature: domain Description: COG3464 Location: 1651944-1652289 bp Feature: domain Description: COG3464 Location: 1 651 944-1 652289 bp Feature: gene Location: 1652486-1652713 bp Feature: gene Location: 1888582-1889823 bp Ori: QDO58253.1 Feature: domain Description: SpoIIE Location: 1889215-1889785 bp Feature: domain Description: SpoIIE Location: 1 88921 5-1 889785 bp Feature: gene Location: 1890322-1890843 bp Ori: QDO58254.1 Feature: domain Description: RimI Location: 1890361-1890757 bp Feature: domain Description: RimI Location: 1 890361 -1 890757 bp Feature: gene Location: 1891630-1892345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1891954-1892143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 891 954-1 8921 43 bp Feature: gene Location: 1892325-1893995 bp Feature: domain Description: Resolvase Location: 1892337-1892775 bp Feature: domain Description: Resolvase Location: 1 892337-1 892775 bp Feature: domain Description: Recombinase Location: 1892865-1893228 bp Feature: domain Description: Recombinase Location: 1 892865-1 893228 bp Feature: domain Description: Zn_ribbon_recom Location: 1893267-1893459 bp Feature: domain Description: Zn_ribbon_recom Location: 1 893267-1 893459 bp Feature: gene Location: 1894128-1894475 bp Ori: QDO58255.1 Feature: domain Description: COG3905 Location: 1894329-1894446 bp Feature: domain Description: COG3905 Location: 1 894329-1 894446 bp Feature: gene Location: 1894584-1895330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1894587-1894899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 894587-1 894899 bp Feature: domain Description: GIIM Note: maturase Location: 1894971-1895190 bp Feature: domain Description: GIIM Note: maturase Location: 1 894971 -1 8951 90 bp Feature: gene Location: 1895460-1895892 bp Feature: domain Description: DUF4259 Location: 1895466-1895586 bp Feature: domain Description: DUF4259 Location: 1 895466-1 895586 bp Feature: gene Location: 1896041-1896823 bp Ori: QDO58256.1 Feature: domain Description: UDG_F5_TTUDGB_like Location: 1896143-1896779 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 8961 43-1 896779 bp Feature: gene Location: 9687176-9688006 bp Feature: domain Description: COG3293 Location: 9687197-9687542 bp Feature: domain Description: COG3293 Location: 96871 97-9687542 bp Feature: domain Description: COG3293 Location: 9687593-9687965 bp Feature: domain Description: COG3293 Location: 9687593-9687965 bp Feature: gene Location: 9688003-9688317 bp Feature: gene Location: 9688445-9689864 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9688766-9689450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9688766-9689450 bp Feature: gene Location: 9689906-9690149 bp Feature: gene Location: 9690470-9690757 bp Feature: domain Description: DUF772 Location: 9690638-9690755 bp Feature: domain Description: DUF772 Location: 9690638-9690755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), COG3464 (Transposase ), SpoIIE (pfam07228), RimI (COG0456), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator )
DUF4259 (pfam14078), UDG_F5_TTUDGB_like, COG3293 (Transposase ), DUF772 (pfam05598)