myRT

myRT report for GCA_007113425.1_ASM711342v1

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Seq: CP041610.1 Streptomyces sp. RLB3-17 chromosome, complete genome (12023175 bp)
Overview 1 RT 1: 1476956-1485209 bp 2 RT 2: 9463838-9467417 bp Neighborhood of RT #1 [1476956, 1485253] SpoIIE RimI RVT-GII Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM DUF4259 UDG_F5_TTUDGB_like Neighborhood of RT #2 [9463838, 9467419] COG3293 COG3293 RVT-GII DUF772 Feature: gene Location: 1476956-1478197 bp Ori: QDO37974.1 Feature: domain Description: SpoIIE Location: 1477589-1478159 bp Feature: domain Description: SpoIIE Location: 1 477589-1 4781 59 bp Feature: gene Location: 1478696-1479217 bp Ori: QDO37975.1 Feature: domain Description: RimI Location: 1478738-1479131 bp Feature: domain Description: RimI Location: 1 478738-1 4791 31 bp Feature: gene Location: 1480113-1480802 bp Ori: QDO46006.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480377-1480776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 480377-1 480776 bp Feature: gene Location: 1480752-1482425 bp Feature: domain Description: Resolvase Location: 1480764-1481202 bp Feature: domain Description: Resolvase Location: 1 480764-1 481 202 bp Feature: domain Description: Recombinase Location: 1481292-1481655 bp Feature: domain Description: Recombinase Location: 1 481 292-1 481 655 bp Feature: domain Description: Zn_ribbon_recom Location: 1481694-1481886 bp Feature: domain Description: Zn_ribbon_recom Location: 1 481 694-1 481 886 bp Feature: gene Location: 1482558-1482905 bp Ori: QDO37976.1 Feature: domain Description: COG3905 Location: 1482759-1482876 bp Feature: domain Description: COG3905 Location: 1 482759-1 482876 bp Feature: gene Location: 1483014-1483760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483017-1483329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48301 7-1 483329 bp Feature: domain Description: GIIM Note: maturase Location: 1483401-1483620 bp Feature: domain Description: GIIM Note: maturase Location: 1 483401 -1 483620 bp Feature: gene Location: 1483890-1484322 bp Feature: domain Description: DUF4259 Location: 1483896-1484016 bp Feature: domain Description: DUF4259 Location: 1 483896-1 48401 6 bp Feature: gene Location: 1484471-1485253 bp Ori: QDO37977.1 Feature: domain Description: UDG_F5_TTUDGB_like Location: 1484573-1485209 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 484573-1 485209 bp Feature: gene Location: 9463838-9464668 bp Feature: domain Description: COG3293 Location: 9463859-9464204 bp Feature: domain Description: COG3293 Location: 9463859-9464204 bp Feature: domain Description: COG3293 Location: 9464255-9464627 bp Feature: domain Description: COG3293 Location: 9464255-9464627 bp Feature: gene Location: 9464665-9464979 bp Feature: gene Location: 9465107-9466526 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9465428-9466112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9465428-94661 1 2 bp Feature: gene Location: 9466568-9466811 bp Feature: gene Location: 9467132-9467419 bp Feature: domain Description: DUF772 Location: 9467300-9467417 bp Feature: domain Description: DUF772 Location: 9467300-946741 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoIIE (pfam07228), RimI (COG0456), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator ), GIIM (pfam08388), DUF4259 (pfam14078), UDG_F5_TTUDGB_like
COG3293 (Transposase ), DUF772 (pfam05598)