myRT

myRT report for GCA_007113425.2_ASM711342v2

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Seq: CP041610.2 Streptomyces sp. RLB3-17 chromosome, complete genome (12022941 bp)
Overview 1 RT 1: 1476656-1484909 bp 2 RT 2: 9463538-9467117 bp Neighborhood of RT #1 [1476656, 1484953] SpoIIE RimI RVT-GII Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM DUF4259 UDG_F5_TTUDGB_like Neighborhood of RT #2 [9463538, 9467119] COG3293 COG3293 RVT-GII DUF772 Feature: gene Location: 1476656-1477897 bp Ori: QDO37974.1 Feature: domain Description: SpoIIE Location: 1477289-1477859 bp Feature: domain Description: SpoIIE Location: 1 477289-1 477859 bp Feature: gene Location: 1478396-1478917 bp Ori: QDO37975.1 Feature: domain Description: RimI Location: 1478438-1478831 bp Feature: domain Description: RimI Location: 1 478438-1 478831 bp Feature: gene Location: 1479813-1480502 bp Ori: QDO46006.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480077-1480476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 480077-1 480476 bp Feature: gene Location: 1480452-1482125 bp Feature: domain Description: Resolvase Location: 1480464-1480902 bp Feature: domain Description: Resolvase Location: 1 480464-1 480902 bp Feature: domain Description: Recombinase Location: 1480992-1481355 bp Feature: domain Description: Recombinase Location: 1 480992-1 481 355 bp Feature: domain Description: Zn_ribbon_recom Location: 1481394-1481586 bp Feature: domain Description: Zn_ribbon_recom Location: 1 481 394-1 481 586 bp Feature: gene Location: 1482258-1482605 bp Ori: QDO37976.1 Feature: domain Description: COG3905 Location: 1482459-1482576 bp Feature: domain Description: COG3905 Location: 1 482459-1 482576 bp Feature: gene Location: 1482714-1483460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1482717-1483029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48271 7-1 483029 bp Feature: domain Description: GIIM Note: maturase Location: 1483101-1483320 bp Feature: domain Description: GIIM Note: maturase Location: 1 4831 01 -1 483320 bp Feature: gene Location: 1483590-1484022 bp Feature: domain Description: DUF4259 Location: 1483596-1483716 bp Feature: domain Description: DUF4259 Location: 1 483596-1 48371 6 bp Feature: gene Location: 1484171-1484953 bp Ori: QDO37977.1 Feature: domain Description: UDG_F5_TTUDGB_like Location: 1484273-1484909 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 484273-1 484909 bp Feature: gene Location: 9463538-9464368 bp Feature: domain Description: COG3293 Location: 9463559-9463904 bp Feature: domain Description: COG3293 Location: 9463559-9463904 bp Feature: domain Description: COG3293 Location: 9463955-9464327 bp Feature: domain Description: COG3293 Location: 9463955-9464327 bp Feature: gene Location: 9464365-9464679 bp Feature: gene Location: 9464807-9466226 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9465128-9465812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94651 28-946581 2 bp Feature: gene Location: 9466268-9466511 bp Feature: gene Location: 9466832-9467119 bp Feature: domain Description: DUF772 Location: 9467000-9467117 bp Feature: domain Description: DUF772 Location: 9467000-94671 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoIIE (pfam07228), RimI (COG0456), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator ), GIIM (pfam08388), DUF4259 (pfam14078), UDG_F5_TTUDGB_like
COG3293 (Transposase ), DUF772 (pfam05598)