myRT

myRT report for GCA_007113505.1_ASM711350v1

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Seq: CP041612.1 Streptomyces sp. S1A1-8 chromosome, complete genome (12036971 bp)
Overview 1 RT 1: 1703558-1711756 bp 2 RT 2: 9085905-9090436 bp Neighborhood of RT #1 [1703558, 1711800] SpoIIE RimI RVT-GII Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM DUF4259 UDG_F5_TTUDGB_like Neighborhood of RT #2 [9085905, 9090624] TetR_N TetR_C_33 mycothiol_MshB RVT-GII MRJP SnoaL_2 Feature: gene Location: 1703558-1704799 bp Ori: QDO17958.1 Feature: domain Description: SpoIIE Location: 1704191-1704761 bp Feature: domain Description: SpoIIE Location: 1 7041 91 -1 704761 bp Feature: gene Location: 1705299-1705820 bp Ori: QDO17959.1 Feature: domain Description: RimI Location: 1705338-1705734 bp Feature: domain Description: RimI Location: 1 705338-1 705734 bp Feature: gene Location: 1706607-1707322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1706931-1707120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 706931 -1 7071 20 bp Feature: gene Location: 1707302-1708972 bp Feature: domain Description: Resolvase Location: 1707314-1707752 bp Feature: domain Description: Resolvase Location: 1 70731 4-1 707752 bp Feature: domain Description: Recombinase Location: 1707842-1708205 bp Feature: domain Description: Recombinase Location: 1 707842-1 708205 bp Feature: domain Description: Zn_ribbon_recom Location: 1708244-1708436 bp Feature: domain Description: Zn_ribbon_recom Location: 1 708244-1 708436 bp Feature: gene Location: 1709105-1709452 bp Ori: QDO17960.1 Feature: domain Description: COG3905 Location: 1709306-1709423 bp Feature: domain Description: COG3905 Location: 1 709306-1 709423 bp Feature: gene Location: 1709561-1710307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1709564-1709876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 709564-1 709876 bp Feature: domain Description: GIIM Note: maturase Location: 1709948-1710167 bp Feature: domain Description: GIIM Note: maturase Location: 1 709948-1 71 01 67 bp Feature: gene Location: 1710437-1710869 bp Feature: domain Description: DUF4259 Location: 1710443-1710563 bp Feature: domain Description: DUF4259 Location: 1 71 0443-1 71 0563 bp Feature: gene Location: 1711018-1711800 bp Ori: QDO17961.1 Feature: domain Description: UDG_F5_TTUDGB_like Location: 1711120-1711756 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 71 1 1 20-1 71 1 756 bp Feature: gene Location: 9085905-9086654 bp Ori: QDO23517.1 Feature: domain Description: TetR_N Location: 9086067-9086196 bp Feature: domain Description: TetR_N Location: 9086067-90861 96 bp Feature: domain Description: TetR_C_33 Location: 9086283-9086592 bp Feature: domain Description: TetR_C_33 Location: 9086283-9086592 bp Feature: gene Location: 9086860-9087693 bp Ori: QDO26518.1 Feature: domain Description: mycothiol_MshB Location: 9086890-9087688 bp Feature: domain Description: mycothiol_MshB Location: 9086890-9087688 bp Feature: gene Location: 9088103-9088468 bp Ori: QDO23518.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9088106-9088445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90881 06-9088445 bp Feature: gene Location: 9088662-9089813 bp Ori: QDO23519.1 Feature: domain Description: MRJP Location: 9088965-9089724 bp Feature: domain Description: MRJP Location: 9088965-9089724 bp Feature: gene Location: 9090112-9090624 bp Ori: QDO23520.1 Feature: domain Description: SnoaL_2 Location: 9090148-9090436 bp Feature: domain Description: SnoaL_2 Location: 90901 48-9090436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoIIE (pfam07228), RimI (COG0456), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator ), GIIM (pfam08388), DUF4259 (pfam14078), UDG_F5_TTUDGB_like
TetR_N (pfam00440), TetR_C_33, mycothiol_MshB (TIGR03445), MRJP (pfam03022), SnoaL_2 (pfam12680)